Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02270 ATGATGGCATGCCAAGAGTGGCCAGAACCAATAATAAGAGTCCAATCCTTAGCTGAAAGTGGCATAAATGCAATCCCTGAACGTTTCATCAAACCTCAATCCCAAAGGCCCAAAACACAATCCAATGTTGTCCCAACAAAACAAGGTTTTAATGATGTTGATGTTGATGTTGATGTTGAGAACATCAATATCCCGGTTATTGATTTTCAAGACCTGTATGGTGAAGACAAGAATCTAAAGGAACAAACACTTAAAAGGGTCTCTGAGGCTTGTAGGGAATGGGGTTTTTTCCAAGTGCTTAACCATGGTGTTAACCATGATTTGATGAAGAGTGCTAGAGAGGTTTGGCGTGAGTTCTTTCACCAACCAATTGAGGCTAAAGAAAAATATGCTAACTCACCACTTACCTATGAAGGCTATGGGAGTAGGTTGGGAATTAAAAAAGGTGCCATTTTGGATTGGAGTGACTACTTCTTTCTCCATTACATGCCTTCTTCTCTTAGGGACCAAGAAAAGTGGCCTTCTTTGCCAAACTCTTTAAGGGATGTGATTAATGAATATGGTGATGAAGTGGTTAAGCTAGGAGGAAGGGTTCTTGAATTGTTATCAATAAACCTTGGTTTGAAGGAGGATTTCTTGATGAATTCATTTGGTGGAGAGAGTGAGATTGGTGCATGCTTAAGGGTTAATTTCTACCCAAAATGCCCTCAACCAGACCTAACTCTTGGGCTCTCATCTCACTCAGACCCTGGGGGTATGACCATACTTTTACCAGATGAAAATGTTTCTGGTCTTCAAGTCCGCAGAGGAGAACATTGGATCACTGTCAAGCCTGTCCCAAATGCATTCATCATCAACATTGGTGACCAAATTCAGGTGCTAAGCAATGCAATGTACAAGAGTATAGAACATAGAGTAATTGTGAACTCAAACAAGGATAGAGTTTCATTGGCCTTCTTTTACAATCCAAGAAGTGATTTACTAATTCAACCTGCTAAGGAGCTTGTGAGTGAGGATAGGCCACCACTCTATCCACCAATGACATTTGATGAATATAGACTTTACATTAGGACCAAAGGACCATGTGGAAAATCTCAAGTTGAATCTTTGACTTCCCAAAAGTGA 1125 0.4036 MMACQEWPEPIIRVQSLAESGINAIPERFIKPQSQRPKTQSNVVPTKQGFNDVDVDVDVENINIPVIDFQDLYGEDKNLKEQTLKRVSEACREWGFFQVLNHGVNHDLMKSAREVWREFFHQPIEAKEKYANSPLTYEGYGSRLGIKKGAILDWSDYFFLHYMPSSLRDQEKWPSLPNSLRDVINEYGDEVVKLGGRVLELLSINLGLKEDFLMNSFGGESEIGACLRVNFYPKCPQPDLTLGLSSHSDPGGMTILLPDENVSGLQVRRGEHWITVKPVPNAFIINIGDQIQVLSNAMYKSIEHRVIVNSNKDRVSLAFFYNPRSDLLIQPAKELVSEDRPPLYPPMTFDEYRLYIRTKGPCGKSQVESLTSQK 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02270 374 Gene3D - 10 358 IPR027443 -
Aip02g02270 374 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 222 323 IPR005123 -
Aip02g02270 374 PRINTS Isopenicillin N synthase signature 87 104 - -
Aip02g02270 374 PRINTS Isopenicillin N synthase signature 283 309 - -
Aip02g02270 374 Pfam non-haem dioxygenase in morphine synthesis N-terminal 64 175 IPR026992 -
Aip02g02270 374 Pfam 2OG-Fe(II) oxygenase superfamily 225 323 IPR044861 -
Aip02g02270 374 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 8 371 - -
Aip02g02270 374 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 371 - -
Aip02g02270 374 SUPERFAMILY Clavaminate synthase-like 11 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02270 Aip-Chr2 94812999 94819074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02270 14 370 Glycosyltransferase AT5G59530 33.516 2.20e-57 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02270 - - gmx:100809662 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02270 02 94812999 94819074 Aip02g02270 02 94812999 94819074 ECH