Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02246 ATGTCATCATCGTTCGGAAGCTCCGCTCCTCCGTACGACGACGATGGCAGCGGCTACGATCCTCGGATGCAGTCTCAGCGATTCGACTCGTTCTCCAACTTCGATGCCGACTCGGTCAAGGACTCGGCCGGCGATTCGTCACCTATTTTCGGTGGCGGCGGTTCGTACGGTGCCGGAGATGACGTGTTCTCGTCTCAAGCGGCGCCGGGGACTCCTTCTCCGCCGTCTATGTATTCTGCCGCTGGGGGATTCATGGCGTTCTCGGCGGAGCAGAACGGGGAGGACGTTGACGGAGGTTTCGGTGTCTCTGAGGTCGTTCCCGGCGAGGGGCTTGCTTTGAGGGAGTGGCGAAGGCAAAACGCGATTCGATTGGAGGAGAAGGAGAAGAAGGAGAAGGAGATGAGGATGCAGATCATAGAGGAAGCGGATGAATACAAAGTTGAGTTCTACAAGAAGCGTGAGGTTAATGTGGAGAACAAGAAGGCTTNNNAAGTTATTCTTTGA 504 0.5536 MSSSFGSSAPPYDDDGSGYDPRMQSQRFDSFSNFDADSVKDSAGDSSPIFGGGGSYGAGDDVFSSQAAPGTPSPPSMYSAAGGFMAFSAEQNGEDVDGGFGVSEVVPGEGLALREWRRQNAIRLEEKEKKEKEMRMQIIEEADEYKVEFYKKREVNVENKKAXXVIL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02246 167 PANTHER CLATHRIN LIGHT CHAIN 3 1 162 - -
Aip02g02246 167 Pfam Clathrin light chain 109 162 IPR000996 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Aip02g02246 167 MobiDBLite consensus disorder prediction 1 81 - -
Aip02g02246 167 PANTHER CLATHRIN LIGHT CHAIN 1 162 IPR000996 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Aip02g02246 167 Coils Coil 113 144 - -
Aip02g02246 167 MobiDBLite consensus disorder prediction 23 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02246 Aip-Chr2 94279648 94280339 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02246 - - aprc:113850159 231.106