Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02204 ATGGCTGGTACACGTAATGTGGCAGAAGATCCCTTGTATACAGATGATGGAACACTTGACATTCATAAAAGACCTGCCAACAAGAAAAAAACTGGAAAGTGGAAGGCATGCCGGTTTATTCTTGGTAACGAATGTTGTGAAAGATTGGCATACTATGGCATGAGCACGAACCTTGTGAACTATCTCCACGACCGTTTTGGCCTTGGAAATGCTGCTGCTGCGAACACTGTTACAACATGGTCGGGGACGTGCTACCTCACGCCATTGCTTGGAGCCTTCTTAGCTGATTCATACATGGGGAGATATTGGACAATAGCCAGCTTCTCAACCATCTATGTCATTGGAATGTCGCTGTTAACATTGTCTGCTGTAGCACCTGGACTGAAGCCTGTGTGTCGCGGTATAAGTGATTGCCATCCAACAACAGGACAAACTGCAGCTCTCTTTATCGCACTCTACTTGATTGCTCTCGGAACTGGCGGTATCAAACCGTGTGTTTCGTCTTTCGGCGCTGACCAGTTCGACGAAAATGATACCATTGAGAGGAAAAAGAAGAGCTCTTTTTTCAACTGGTTTTACTTTTCCATCAACGTGGGTGCACTCATTGCTTCCTCAGTGCTGGTTTGGATACAAATGAATGTGGGTTGGGGATGGGGTTTTGGAGTCCCTGCGGTTGCCATGATCATTGCAATTATATTTTTCTTCATCGGTAGTCGATGGTACCGGCTGCAAGTACCCGGTGGCAGCCCTCTTACTAGGATTTGCCAAGTCATAGTCGCCGCCACAAGGAAATTCGGTGTTCAGGTGCCAGAGGATAAGTCTCTTCTTTATGAGACTTCAGATGCAGAATCTGCCATCAAAGGATGCCGCAAACTTGAACACACACAAGAACTTAAATGTTTGGATAAGGCAGCAGTAGAGACAGATTCCGACCGCCTAAAGGATTTGCCGAATCCATGGAAGCTCTGCACGGTAACACAAGTCGAAGAGTTCAAATCCGTGATTCGCTTGCTCCCAGTTTGGGCTTCACTTATTGCCTTTGCAACTGTGTACTCTCAAATGAACACCATGTTTGTTCTACAAGGCAACACAATGGACCAGCATATTGGTCCAAAATTCAAGATTCCATCAGCCTCCCTCTCCCTTTTCGACACTCTGAGCGTCATCTTTTGGGCACCGGTCTATGACCGCGTCATCGTCCCATTCGCAAGGAAGTTCACCGGACACGAACGCGGATTCACGCAACTTCAACGGATAGGCATTGGCCTCATCATCTCCATTGTGTCCATGATTGTGGCCGGAATCCTAGAGGTCGTTCGCCTCAACATGGTCCGGAAAAACAACTACTATGATCTCGAGACCATCCCCATGTCGATCTTCTGGCAAGTGCCGCAATATTTCCTCGTCGGAGCTGCGGAAGTCTTCACGAACATCGGTCAGATGGAGTTCTTTTATGGTGAGGCACCTGATGCTATGAGAAGTCTCTGCTCGGCTCTGTCACTAACAACTATGGCCTTGGGAAATTATGTTAGTACCCTTCTTGTTACCATTGTGACAAAAGTTACCACAAGTCATGGAAGGCTTGGTTGGATACCGGACAATCTGAATAGGGGCCATCTTGATTACTTCTTTTGGCTTTTGACCCTCCTCAGCTTGCTCAACTTCCTTGTGTATCTATGGATTGCAAAGAGGTACAAATACAAAAGGGTGATAACAAATGTTCGTTGA 1728 0.467 MAGTRNVAEDPLYTDDGTLDIHKRPANKKKTGKWKACRFILGNECCERLAYYGMSTNLVNYLHDRFGLGNAAAANTVTTWSGTCYLTPLLGAFLADSYMGRYWTIASFSTIYVIGMSLLTLSAVAPGLKPVCRGISDCHPTTGQTAALFIALYLIALGTGGIKPCVSSFGADQFDENDTIERKKKSSFFNWFYFSINVGALIASSVLVWIQMNVGWGWGFGVPAVAMIIAIIFFFIGSRWYRLQVPGGSPLTRICQVIVAATRKFGVQVPEDKSLLYETSDAESAIKGCRKLEHTQELKCLDKAAVETDSDRLKDLPNPWKLCTVTQVEEFKSVIRLLPVWASLIAFATVYSQMNTMFVLQGNTMDQHIGPKFKIPSASLSLFDTLSVIFWAPVYDRVIVPFARKFTGHERGFTQLQRIGIGLIISIVSMIVAGILEVVRLNMVRKNNYYDLETIPMSIFWQVPQYFLVGAAEVFTNIGQMEFFYGEAPDAMRSLCSALSLTTMALGNYVSTLLVTIVTKVTTSHGRLGWIPDNLNRGHLDYFFWLLTLLSLLNFLVYLWIAKRYKYKRVITNVR 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02204 575 Gene3D MFS general substrate transporter like domains 7 572 IPR036259 -
Aip02g02204 575 SUPERFAMILY MFS general substrate transporter 22 568 IPR036259 -
Aip02g02204 575 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 2. 189 201 IPR018456 GO:0006857|GO:0016020|GO:0022857
Aip02g02204 575 PANTHER PROTEIN NRT1/ PTR FAMILY 8.1 18 571 - -
Aip02g02204 575 Pfam POT family 102 531 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aip02g02204 575 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 91 115 IPR018456 GO:0006857|GO:0016020|GO:0022857
Aip02g02204 575 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 18 571 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02204 Aip-Chr2 92972179 92976443 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02204 7 571 Organic Solute Cotransporters AT3G54140 74.205 0.0 891
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02204 K14638 - gmx:100779289 947.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02204 02 92972179 92976443 Aip02g02204 02 92972179 92976443 ECH