Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01182 ATGGAGAACTTGTTGCGCCTAGTGGATCATGAGGAGTTTTTCTCAAGAAGATGCATTTGGGTGAATGGCCCTGTAATTGTAGGTGCAGGACCCTCAGGTCTTGCAACTGCAGCATGCCTTAGAGAACAAGGGGTACCCTTCATGCTTCTCGAAAGAGAAGATTGCATAGCTTCCTTATGGCAAAAGCGCACTTACGACCGACTCAAACTTCACCTTCCAAAGCAGTTTTGCCAACTCCCCAAGCTTCCATTCCCTGCGGATTTCCCAGAATACCCTTCCAAGAAGCAGTTCATTCAGTACCTTGAATCCTACGCAACCAAATTCCAGATCAATCCAAGGTTCAATGAGTGTGTCCAGTTTGCAAGGTATGATGAGACTAGCGGCTTATGGAGGGTCAAGACTAAAACGTCTGCCTCCGCTGAGTTCGAGTATATTTGGGAGAAATTCAGGGGAAAGAAGGTTCTCGTCGTCGGATGCGGCAACTCCGGCATGGAACTCTCGCTTGACCTCTGCAATTACAATGCATCACCGTCAATGGTGGTTCGCAGCTCGGTTCATGTTTTGCCAAGAGAAATATGCCGAAAATCGACGTTTGAATTGGCGGTTACCCTGATGAAATGGTTGCCGTTATGGTTGGTTGACAAGCTGCTACTGATCCTGGCATGGTTGGTTTTGGGAAACATAGCGAAATACGGGCTAAAGCGGCCGGCGGAGGGGCCGTTACAGCTGAAGAACTCGAAGGGGAAGACACCGGTTCTTGACATTGGGACCTTAGAGAAGATCAGATCCGGTGATATAAAAGTGGTGCCAGGGATCAAGAAGCTTAACGGTTTCAGCGTCGAGCTTGTTAACGGTGAAGAGCACGACGTTGACGCCGTTGTTCTTGCCACCGGTTACCGTAGCAATGTCCCTTGTTGGCTCCAAGAAGGTGAATTTTTCTCAAAGAATGGGTTCCCAAAGTCACCATTCCCAAATGGCTGGAAAGGGAATTCAGGGCTTTATGCTGTTGGGTTCACAAGGAGAGGCCTCTCAGGTGCTTCTTCTGATGCTATCAGAATTGCACAAGATATTGGTCATGTTTGGAAGCAAGACACTAAGCAAAAGAAAAAAACAACCACTGCTTGCCATAGACGCTGCATTTCCCAATTCTAA 1152 0.4783 MENLLRLVDHEEFFSRRCIWVNGPVIVGAGPSGLATAACLREQGVPFMLLEREDCIASLWQKRTYDRLKLHLPKQFCQLPKLPFPADFPEYPSKKQFIQYLESYATKFQINPRFNECVQFARYDETSGLWRVKTKTSASAEFEYIWEKFRGKKVLVVGCGNSGMELSLDLCNYNASPSMVVRSSVHVLPREICRKSTFELAVTLMKWLPLWLVDKLLLILAWLVLGNIAKYGLKRPAEGPLQLKNSKGKTPVLDIGTLEKIRSGDIKVVPGIKKLNGFSVELVNGEEHDVDAVVLATGYRSNVPCWLQEGEFFSKNGFPKSPFPNGWKGNSGLYAVGFTRRGLSGASSDAIRIAQDIGHVWKQDTKQKKKTTTACHRRCISQF 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01182 383 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Aip02g01182 383 PRINTS FAD-dependent pyridine nucleotide reductase signature 153 171 - -
Aip02g01182 383 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 147 381 - -
Aip02g01182 383 Pfam Flavin-binding monooxygenase-like 127 304 IPR020946 GO:0004499|GO:0050660|GO:0050661
Aip02g01182 383 Pfam Flavin-binding monooxygenase-like 26 111 IPR020946 GO:0004499|GO:0050660|GO:0050661
Aip02g01182 383 Gene3D - 147 367 IPR036188 -
Aip02g01182 383 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 147 381 - -
Aip02g01182 383 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 10 145 - -
Aip02g01182 383 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 10 145 - -
Aip02g01182 383 Gene3D - 23 146 IPR036188 -
Aip02g01182 383 PRINTS Pyridine nucleotide disulphide reductase class-II signature 149 173 - -
Aip02g01182 383 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Aip02g01182 383 SUPERFAMILY FAD/NAD(P)-binding domain 25 362 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01182 Aip-Chr2 23981454 23983130 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01182 K11816 - rcu:8262795 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g01182 02 23981454 23983130 Aip02g01182 02 23981454 23983130 ECH
Aip02g01182 02 23981454 23983130 Aip06g01497 06 25353649 25355307 PCT