Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01002 ATGGCCTTCGTTCGCGCACCGTCACCGTTTCTTCTCGTCCTCGTTCTAGCTCTCTCGATCTTCGCCGCCATTACCGCCACCACCACTATTCCCCAACCGATCTCCGATCATCACCGATCCGCCGCATTGAACCTCTTCGCCCCTTCTCACGGATCGTTTCCCAGTTTGCAGGATGCGTATGAGGCTCTCAGGGTTTTTGAGATTCTAGGGATTGAAGAGAAGCACCGTGTGAGCACGGACACATGTAAGGTGGTGTTGGAAAATCTGAGTTCGTTGTCATCGTCTCTTAAGGATTTGTTCTATGCTTTGAAAGTTAATGGCATATTGAAATGCAAGGTTAATGGGGAGGTTTTCGAGGGTATTGCTTCAAGACTCAAGGCTTCTATCAGCGATGCAAGTCCTTTGCCTGACCTATACTACTCAATAGGAGGTTTGGTTCTCATAAAGGATCAGGATTCAAATGTTGATGTTCTTCTTGCTGATGCCACGGGAACTTTTCAGTCAATCAAGGCTCAAAGCCAAAGTGATGGAAAATGGCGCTACAGTTCTGACAAAACGGAATCCAGTGCCTATGCTGCTGGATTAGCATTTGAAGCCCTTGCTGGAGTGATTTCACTAGCATCATCTGAAATTGACCAGTCTAAGGTCAATACTGTAAAACATGATATACTGAAGCTTTTTGACAGCATTGAGAAAAATGATGATGGAAGCTTCTATTTTGATGGGGAAACTGTTGGTGGGCATGAGCATCAGGATTCCCTTTCCACGACCTCTTCAGTTGTTCGAGGGGTTACTGCATTTGCTGCTGCAGTTTCTGGAGAAATAAATCTTCCAGGGGATAAAACATTGGGTTTAGCAAAGTTTCTCTTGGGCATTGGAGTCCCAGGAGATGCTAAGGACTTCTTCAATCAAGTTGAATCGTTAGCTTTTCTGGAGAGCAAAAGGGTTACCATCCCATTGATATTGTCACTTCCTGAAACGGTCTATTCATTAACCACGAAAGGCCAACTTAAGGTTCGTGTGAGTACAGCACTTGGTTCAGCCGCACCACCTCTAGTAGTTAAGCTTGTCCGAGCTTTCAGTTCTGGTGCAAAAGATTCAAGTATTATTGAGAGCAAGGAACTCCAGTATGACAAAAGAAGTGGACTTCATGTCTTGGATGGTTTCACAAATAATGTGGATGTGGGAACATATGTGTTTGTTTTTGAGATTGTGCTTCATGACACTCACAGTAAACAAGTTTATGCTACCGGCGGCCAAATTCACATGCCTATATATGTTACTGGAATTATTGCAGTCAGCAATGCAGAAATCGGAGTTCTGGGTGACCTTGGAAGTGTCCAGACAAAAAAAGCGCTAGATCTTGCCGGAAATGATGTTGTTTCATTTTCAGCTAACCATCTGCAGAAGTTGCGGTTTTCTTTCCAATTGGCAACTCCTCACGGTCATGTTTTTAAGCCACATCAGGCAATTTTGAAGTTTAGGCATGAGATAAAGGTAGAACACGTCTTTGTGATTGGAAATGTTGGCAAGAAGTTTGAGATCACTCTGGATTTTCTTGGCCTGGTGGAGAAACTGTTCTATCTCTCAGGCAAATATGATATTGAGCTGACTGTTGGTGATGCTGCCATGGAAAACTCTTTCATACGGTTGCTTGGCCATGTCAAATTAGATCTTCCGGAAGCACCTGAGAAGGCAGCCCAACCTCCTGCACCCCCAGTTGACCCGTACTCAAGATATGGGCCCAAAACAGAGATAACTCACTTATTCAGGACCCCTGAAAAGCGACCACCTCAGAATCTCTCTATTACTTTCTTGGGTTTGATCCTTTTGCCATTCCTTGGCTTTTTAATTGGGTTATTACGTTTGGGGGTGAACCTGAAGAATTTCCCCAGTTCAACAGTACCTGCTGCATTTGCCATGCTGTTCCAACTCAGTATTGCCGCAGTGCTGTTGCTTTATGTACTTTTCTGGTTGAAGCTGGACCTGTTCACTACTCTCAAAACACTTGGCTTTTTGGGAGCTTTCTTGATGTTTTCCGGGCACCGGATTCTCTCCTATCTTGCTTCGACATCAACCAAGTTGAAATCTGCATGA 2097 0.444 MAFVRAPSPFLLVLVLALSIFAAITATTTIPQPISDHHRSAALNLFAPSHGSFPSLQDAYEALRVFEILGIEEKHRVSTDTCKVVLENLSSLSSSLKDLFYALKVNGILKCKVNGEVFEGIASRLKASISDASPLPDLYYSIGGLVLIKDQDSNVDVLLADATGTFQSIKAQSQSDGKWRYSSDKTESSAYAAGLAFEALAGVISLASSEIDQSKVNTVKHDILKLFDSIEKNDDGSFYFDGETVGGHEHQDSLSTTSSVVRGVTAFAAAVSGEINLPGDKTLGLAKFLLGIGVPGDAKDFFNQVESLAFLESKRVTIPLILSLPETVYSLTTKGQLKVRVSTALGSAAPPLVVKLVRAFSSGAKDSSIIESKELQYDKRSGLHVLDGFTNNVDVGTYVFVFEIVLHDTHSKQVYATGGQIHMPIYVTGIIAVSNAEIGVLGDLGSVQTKKALDLAGNDVVSFSANHLQKLRFSFQLATPHGHVFKPHQAILKFRHEIKVEHVFVIGNVGKKFEITLDFLGLVEKLFYLSGKYDIELTVGDAAMENSFIRLLGHVKLDLPEAPEKAAQPPAPPVDPYSRYGPKTEITHLFRTPEKRPPQNLSITFLGLILLPFLGFLIGLLRLGVNLKNFPSSTVPAAFAMLFQLSIAAVLLLYVLFWLKLDLFTTLKTLGFLGAFLMFSGHRILSYLASTSTKLKSA 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01002 698 Pfam Oligosaccharyltransferase subunit Ribophorin II 15 690 IPR008814 GO:0006487|GO:0008250|GO:0016021
Aip02g01002 698 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 14 698 - -
Aip02g01002 698 PANTHER RIBOPHORIN II 14 698 IPR008814 GO:0006487|GO:0008250|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01002 Aip-Chr2 18329562 18337382 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01002 K12667 - gmx:100806815 942.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g01002 02 18329562 18337382 Aip02g01002 02 18329562 18337382 ECH
Aip06g01411 06 22925077 22939098 Aip02g01002 02 18329562 18337382 PCT