Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00831 ATGGCAACTTCATTAACACAAGATCAGATTGCTAAATTTCGGGAAGCTTTTTCTGTAATTGACAAGGACTCTGATGGATTCATTACTTTGGAAGAGCTTATAGCAATTTTACAACAATTAGATGGAAATTCAACAAAAGAAGAAGTCCAAGAAATGATTAGTGAAGCTGATATTGATGGAAATGGGATAATAAATTTTGAAGAGTTCTTAACTTTTATGGGAAGGAAAATCAAGGAAAATCAGGCTGAGGAGTTAAAAGATGCATTTAAAGTGTTTGATAGAAATAATGATGGATACATATCAGCCACTGAGCTGAGACAAGTGATGATGAAAATGGGAGAGAGGCTAACAGATGAAGAAGCTGAAGAAATGATAAGAGAGGCAGATTTGGATGGTGATGGTCAAGTCAGCTATGAAGAATTTGCAAGAATGATGTTGCTCAATTGA 447 0.349 MATSLTQDQIAKFREAFSVIDKDSDGFITLEELIAILQQLDGNSTKEEVQEMISEADIDGNGIINFEEFLTFMGRKIKENQAEELKDAFKVFDRNNDGYISATELRQVMMKMGERLTDEEAEEMIREADLDGDGQVSYEEFARMMLLN 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00831 148 ProSitePatterns EF-hand calcium-binding domain. 57 69 IPR018247 -
Aip02g00831 148 ProSiteProfiles EF-hand calcium-binding domain profile. 44 79 IPR002048 GO:0005509
Aip02g00831 148 ProSiteProfiles EF-hand calcium-binding domain profile. 8 43 IPR002048 GO:0005509
Aip02g00831 148 Gene3D - 77 148 - -
Aip02g00831 148 Gene3D - 1 76 - -
Aip02g00831 148 PANTHER EF HAND CALCIUM-BINDING FAMILY PROTEIN 1 146 - -
Aip02g00831 148 PANTHER CALCIUM BINDING PROTEIN 1 146 - -
Aip02g00831 148 ProSitePatterns EF-hand calcium-binding domain. 93 105 IPR018247 -
Aip02g00831 148 CDD EFh 84 145 IPR002048 GO:0005509
Aip02g00831 148 CDD EFh 12 73 IPR002048 GO:0005509
Aip02g00831 148 SUPERFAMILY EF-hand 1 147 IPR011992 -
Aip02g00831 148 ProSitePatterns EF-hand calcium-binding domain. 129 141 IPR018247 -
Aip02g00831 148 ProSiteProfiles EF-hand calcium-binding domain profile. 116 148 IPR002048 GO:0005509
Aip02g00831 148 ProSitePatterns EF-hand calcium-binding domain. 21 33 IPR018247 -
Aip02g00831 148 SMART efh_1 120 148 IPR002048 GO:0005509
Aip02g00831 148 SMART efh_1 84 112 IPR002048 GO:0005509
Aip02g00831 148 SMART efh_1 48 76 IPR002048 GO:0005509
Aip02g00831 148 SMART efh_1 12 40 IPR002048 GO:0005509
Aip02g00831 148 Pfam EF-hand domain pair 12 73 IPR002048 GO:0005509
Aip02g00831 148 Pfam EF-hand domain pair 83 145 IPR002048 GO:0005509
Aip02g00831 148 ProSiteProfiles EF-hand calcium-binding domain profile. 80 115 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00831 Aip-Chr2 13245084 13246806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00831 13 76 EF-hand Containing Proteins AT3G56800 51.562 3.75e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00831 K02183 K13448 gmx:100778454 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00168 06 1708460 1712156 Aip02g00831 02 13245084 13246806 PCT