Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00734 ATGTCGATCAGCTTTATACCTGGCTTTTTGCAAGAACGTGCAATCGATGCAGCAACTGCTTACGTAACAACGCAACTAGGCTACGTGTGGGATTACGAGAAAAGATTCGTCGATGTAAGCAAAGCTGTCGAGGCTCTCAAGAATGATAGGGATGGAGTGCGTGATAAAGCCGAAGAAGATGAAGGACGGTATGGGAGAGCTATATATGATAATGTTGTAGAATGGTTGGCTCGTGTCGATGGAATTCTTGCTAAATATGAAAAATTCAAACAAGAACATGATAATAATGCAGGCTATGCACTTGCTTTTCCATTTCAAAATCTAGACATAAGATATCATCGCAGCAAAACAGCAGAAGATATCAAAGAAAGGGTTGAAGAATTGCAAAATGAGAAGCATGATAGTATATCTCGCTGGCAGGGCCCACCTTCTTCCATGGGTTATGCGCTTCCTTCTGTTGAATATGAAGAACTTGATTCAAGAAAACAAAATATGGAAGATGTTAAAAAAGCCTTGGAAGATTCGAGTGCTACAATGGTTGGTATTCACGGCCTAGCTGGTATGGGAAAGACTACTTTGGTCATAAAAGCTATTAACACACTTCAAAGTCGAGAACCTAAGTTATTTGATATGGTGATTATGGCAAATGTGGGCAAAAATCCAGACATCAGAAAAATTCAAGGCCAGATTGCTGACATGCTCGGAATAACATTGCAAGAGGAGAGTGAGTATGCGAGAGCTATTCGCATAAGAGAGAAATTGAAGAAAGAAAAAAACACTCTTATAATCCTTGATGATATGTATACAAAAGTGGACTTGGATATGTTGGGAATTCCATCACAGAATGAAGATGACAAAAAGAATCTCGTTCTCAAACAAAGAATAAGATCTTCTAATCCCTCTGGAGCAACTCTAACTAAGCCAGAGACAGAGAATTTTGTTGGTGGTAGACAAAATTTGACAAGATTAAAGTCAGGAATAGATGCTAACAGGACGAGAACAGAGAAAAAAATTGAAGACACCTCTAATGGTTCTAGTAAAGTAAGAAAAGCATCAGAAGAGAATAAAAAAGGATGCAAGGTTTTGTTAATTTCTGAGGCAAAACGAGTATTGAACCAGATGGATGTAAATGCAAATTCAATTATCTCTTTAGATATCATAAACCCTGACGATGCCAAAATATTGTTCAAAAAAAAGGTGGGAATAACAGATGAGAAAAATTCTGATCTTGAACGGCTAGCCATTGACATTGCCAAGAAGTGTCACGGGTTGCCCATGTCAATAGTTACAACTGCAAAGGCATTGAAAAATCAAAGCCGCTATGTTTGGCAGGAGACCCTTAACACACTTGAAAGACAAAAGCTTGCAGGAACACCTGAGTATTCTACAAAGTTGAGTTATGAGCTTTTAGCAAATGAGGAGCTCAAGCTTATCTTTTTGCTTTGTGCTTGTATGGATCAAGATGCATTGGTCTCAGACTTAGTGAGACTATGCATTGGTTTGGGTTTTCTTGAAGGCGTCTACACAGCAAAGGAAGCCAGAGATCAAGTGCAAATGTTGCTTATTCATTTAAAAGAGTCAGGTTTGTTGTCTGACAGTTACTCAAATGATCGTTTCACAATGCAAAACCTTGTTCGCAAGGCAGCTTTGTTGATAGCATCAGAGAATAATGTGTTCGTGCTGGCAAAAAGAAAGCTAGATGAATGGCCTGATGATGATAAACTTGAAAGTCAACATTTCGAAATACCAAATGACTTTTTCCGAGAAATGAAAGAACTTAGAGTGTTGGTTCTGCTTGGCATTGATCTCTCCAAAATGTCTTCATCAATGAAATGCCTAAGAAAACTCCGAAAGCTTTGTTTGGAGCAATGCATTAACCTAGATGAGGAATTATGCAACAGTATTGGCACGTTCATGAAGAATCTAAGAATTCTAAGCTTTTCTGGATCTGATATTAAAAGCTTGCCTACTAAATTGAAGGGTTTGTCAAAGCTGCAAATTCTTGACTTAAGTAATTGCTCCCAACTAAAATCAATTCAAGCTGGTGTAATATCTAGCTTGACAAGTTTGGAGGAGTTGTACATGAGAAACACTTTGGTTGAATGGAGGATGGATAATAGAGAGGAAACTGAAAACAAAAATGCTAGTCTTTCGGAGTTGGGACATCTAACTCAAATAACAAATGTTGACTTTCAAATCCCAAGTGTTGCCCATTTGCCAGAAAACTTATTCTTTGATAAGCTGCATAGCTACAAAATTGTAATTGGCTCGTCAAGTACATTTTTGGAGCCAGATTTCAAGATTCCGGAGAAATATCAACTGTTGAGGTATTTGGCAATACTGGAGAAAGATGTTGGCATTCATTCTCAGAAAGGGATCAAAATGTTGTTTGAAAGAGTTGAGAATTTGTTGCTGGAAGAACTCAACGGTGTCCAAGACATCTTTTATGCACTGAATTTGAAAGGGTTTCCATGTCTTAAGACTTTGTCCATTGTGAGTACTCTTAGCATTCGATATTTGATCAACCCACAGGAGAGGAAGCATCCTGAGAATGCTTTTCCGAAACTGGAGACATTGCACCTCTACAAGCTCGATAACATGGAGCAACTATGCTCTCGTGTGTCACTTTCATCCTCCTCATTTTGTAAACTAAAAGTTGTCAAGATTAAGCTTTGTGGTTTATTAAAGAATGTCTTTGTAATGTCTATGGTCAAGCTTTTGGTTGCTCTTCAAACAATTGAAATTTTAGAATGTAATTCTCTAAAGGAGATTGTCTTTGTGGAAGATACACAAGATTCTAACACGTCGAAGCCTCTTAAGTTTCAAGAATTACGCACTTTGACATTAAAATCATTACCTGAGTTTCATGGATTCTGTTCCATTTCATCTACAGCGCAACAAAAAGTATTGTTCGATGAGCAGGTTGAATTCTCAAAATTAGAGAGATTGCAGTTGTCCTCTATCCAAATCCACCAAATATGGAATGGCAAAAATCCTCCTTTTGGAAAATTGGTACACTTGGAAGTGAATGGTTGCGGTAATTTAAAAAGTTTGTTAACATTGTCTATGGCTATAAATATGAAGACTCTCCAAAGCCTATCTGTCAGCGAGTGTGACAAAATGGGGCAGATTCTTCTCAACGAGAACAGCAATGATATTGAAAGTGAAAAGAAGGTATGTACGTAA 3186 0.3779 MSISFIPGFLQERAIDAATAYVTTQLGYVWDYEKRFVDVSKAVEALKNDRDGVRDKAEEDEGRYGRAIYDNVVEWLARVDGILAKYEKFKQEHDNNAGYALAFPFQNLDIRYHRSKTAEDIKERVEELQNEKHDSISRWQGPPSSMGYALPSVEYEELDSRKQNMEDVKKALEDSSATMVGIHGLAGMGKTTLVIKAINTLQSREPKLFDMVIMANVGKNPDIRKIQGQIADMLGITLQEESEYARAIRIREKLKKEKNTLIILDDMYTKVDLDMLGIPSQNEDDKKNLVLKQRIRSSNPSGATLTKPETENFVGGRQNLTRLKSGIDANRTRTEKKIEDTSNGSSKVRKASEENKKGCKVLLISEAKRVLNQMDVNANSIISLDIINPDDAKILFKKKVGITDEKNSDLERLAIDIAKKCHGLPMSIVTTAKALKNQSRYVWQETLNTLERQKLAGTPEYSTKLSYELLANEELKLIFLLCACMDQDALVSDLVRLCIGLGFLEGVYTAKEARDQVQMLLIHLKESGLLSDSYSNDRFTMQNLVRKAALLIASENNVFVLAKRKLDEWPDDDKLESQHFEIPNDFFREMKELRVLVLLGIDLSKMSSSMKCLRKLRKLCLEQCINLDEELCNSIGTFMKNLRILSFSGSDIKSLPTKLKGLSKLQILDLSNCSQLKSIQAGVISSLTSLEELYMRNTLVEWRMDNREETENKNASLSELGHLTQITNVDFQIPSVAHLPENLFFDKLHSYKIVIGSSSTFLEPDFKIPEKYQLLRYLAILEKDVGIHSQKGIKMLFERVENLLLEELNGVQDIFYALNLKGFPCLKTLSIVSTLSIRYLINPQERKHPENAFPKLETLHLYKLDNMEQLCSRVSLSSSSFCKLKVVKIKLCGLLKNVFVMSMVKLLVALQTIEILECNSLKEIVFVEDTQDSNTSKPLKFQELRTLTLKSLPEFHGFCSISSTAQQKVLFDEQVEFSKLERLQLSSIQIHQIWNGKNPPFGKLVHLEVNGCGNLKSLLTLSMAINMKTLQSLSVSECDKMGQILLNENSNDIESEKKVCT 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00734 1061 SUPERFAMILY RNI-like 584 916 - -
Aip02g00734 1061 Coils Coil 118 138 - -
Aip02g00734 1061 Gene3D - 149 298 IPR027417 -
Aip02g00734 1061 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 482 IPR027417 -
Aip02g00734 1061 Coils Coil 155 175 - -
Aip02g00734 1061 Pfam NB-ARC domain 348 468 IPR002182 GO:0043531
Aip02g00734 1061 Pfam NB-ARC domain 162 296 IPR002182 GO:0043531
Aip02g00734 1061 PANTHER RPP4C4 603 1055 - -
Aip02g00734 1061 PRINTS Disease resistance protein signature 254 268 - -
Aip02g00734 1061 PRINTS Disease resistance protein signature 660 676 - -
Aip02g00734 1061 PRINTS Disease resistance protein signature 421 435 - -
Aip02g00734 1061 PRINTS Disease resistance protein signature 179 194 - -
Aip02g00734 1061 PANTHER - 12 576 - -
Aip02g00734 1061 Coils Coil 43 63 - -
Aip02g00734 1061 Gene3D - 387 470 IPR042197 -
Aip02g00734 1061 Gene3D Ribonuclease Inhibitor 574 1044 IPR032675 -
Aip02g00734 1061 PANTHER - 603 1055 - -
Aip02g00734 1061 PANTHER RPP4C4 12 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00734 Aip-Chr2 11231375 11244778 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00734 - - aip:107628196 2031.53