Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00602 ATGCAACGCGCAAGATCGCTCCTAACAAGGTTTAATCCAATCGCATACAGATACAGATACAGATGCCAAAGCCGAACCCTGTGTTCTTCTTCGAACGAGGAAGTTGTGGTTGTTGAAGGAAACGGTTACTCGAGAATGGCAATTCTCAACAGACCCACTGCTCTCAACGCCCTCAACACCTCCATGGTATTATTATTATTTGATAATTTCTGTTTAATTAATCATTATTTGTGGTTTGTCTCGCTGACTGACTCAACTCAGGTGGCTACCCTCACCAAACTTTACCGAGCTTGGGAAGATAACCCCGACGTTGGCTTTGTCACCATCAAGGGCAGTGGTCGGGCATTTGCAGCTGGCGGTGATATTGTCGCCATTTACCATTTCATCAACAGAGCCAACATGGAAGCCTGCAAGGAATTCTTCCGAACAATATATCGTTTTATTTACGTCATAGGTACATATATGAAGCCACATATCGCTCTTCTGAATGGCATTACCATGGGTGGTGGAGCTGGAATTTCAATCCCCGGCACTTTTCGAGTTGCAACCGACAAAACTATTTTTGCTACCCCTGAAGTTCTTATTGGATTTCACCCTGATGCTGGAGCATCTTTCTACCTTTCACATTTACCTGGTCACTTAGGCGAATACTTGGCCCTAACAGGGGAAAAGCTCAATGGAGTAGAGATGGTTACTTGTGGACTTGCTACACACTACTCACTAACTGCAAGGCTCCCGTTAATTGAAGAACAGCTGGGGAAATTAGTTACTGATGATCCTTCTGTCATTGAAACCACTTTAGAACAGTATGGTGACCTTGTACACTCAGATAGCAGTAGTGTACTTCAAAGGATTGAAATTGTAGATAAATGCTTTTGCCATGACACAGTGGAAGAGATTGTTGATTCTTTGGTGAGCTTTACATCTACCGTTAAATTTAAAGTGGCAAGTGAAACAAATGATGCATGGTGCATTTCTACCCTAAATAGACTTAAAGAAGCTTCGCCATTGAGCTTGAAGGTTTCCTTGAGATCAATACGAGAGGGTAGATTTCAGACTCTTGACCAGTGCTTGTCACGTGAGTACCATATGACTTTACAAGCAACATCTAAGCAGATTTCTGGTGACTTTTGTGAGGGGATAAGGTCTCGTGTGGTGGATAAGGACTTTGCACCAAAGTGGGATCCTCCAACATTGGAAAAGGTGTCTCAAGACATGGTGGATCAGTACTTCTCACCTCTAAGTGAATTTGAACCTGGTCTAGGGCTCCCCACAAAAGTTCGAGAAGCATTTTTGTAA 1299 0.4311 MQRARSLLTRFNPIAYRYRYRCQSRTLCSSSNEEVVVVEGNGYSRMAILNRPTALNALNTSMVLLLFDNFCLINHYLWFVSLTDSTQVATLTKLYRAWEDNPDVGFVTIKGSGRAFAAGGDIVAIYHFINRANMEACKEFFRTIYRFIYVIGTYMKPHIALLNGITMGGGAGISIPGTFRVATDKTIFATPEVLIGFHPDAGASFYLSHLPGHLGEYLALTGEKLNGVEMVTCGLATHYSLTARLPLIEEQLGKLVTDDPSVIETTLEQYGDLVHSDSSSVLQRIEIVDKCFCHDTVEEIVDSLVSFTSTVKFKVASETNDAWCISTLNRLKEASPLSLKVSLRSIREGRFQTLDQCLSREYHMTLQATSKQISGDFCEGIRSRVVDKDFAPKWDPPTLEKVSQDMVDQYFSPLSEFEPGLGLPTKVREAFL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00602 432 Pfam Enoyl-CoA hydratase/isomerase 88 411 IPR045004 -
Aip02g00602 432 CDD crotonase-like 49 238 - -
Aip02g00602 432 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 1, MITOCHONDRIAL 26 431 - -
Aip02g00602 432 Gene3D - 81 421 - -
Aip02g00602 432 SUPERFAMILY ClpP/crotonase 34 397 IPR029045 -
Aip02g00602 432 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 26 431 IPR032259 GO:0003860
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00602 Aip-Chr2 8996837 9000856 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00602 1 432 Acyl Lipid Metabolism Gene Families AT4G31810 54.128 1.84e-171 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00602 K05605 - gmx:100801676 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00602 02 8996837 9000856 Aip02g00602 02 8996837 9000856 ECH