Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00588 ATGGACATTGATGTGTCAAAGTTCTTCAACACATGCCTCCTATTCGTGGCCACCATTGTTGTGGCCAAGCTCATCTCAGCCTTCATTGTCCCTAAATCAAGAAAGCGCCTTCCCCCAATCGTGAAGGGCCTTCCATTCATCGGAGGCTTACCCCGATTCCTCAAAGGTCCAATCTTTATGCTCCGTGAAGAGTACCCTAAACTGGGTGGCGTCTTCACCCTCAAGATGTTCCACAAAAACATCACCTTTTTGATCGGTCCCGAAGTTTCTGCTCATTTCTTCAAGGCCCCAGAATCTGAACTCAGCCAGCAAGAGGTGTATCAGTTCAATGTTCCAACTTTTGGACCCGGTGTTGTCTTTGATGTTGATTACTCTGTTCGCCAGGAACAGTTCAGGTTCTTCACTGAGGCCCTTAGGGTTAACAAGCTCAAGAGCTATGTCGATCAGATGGTTACTGAAGCTCAGGACTACTTCTCAAAGTGGGGAGAAAGTGGTGAGGTTGATTTGAAGTATGAGCTCGAACATTTGATCATCTTGACAGCTAGTAGGTGTCTCTTGGGACGTGAAGTTCGTGACAAGCTTTTCGACGATGTGTCTGCATTGTTCCATGACCTTGATAATGGGATGCAACCAATCAGTGTTCTCTTTCCATACCTTCCCATCCCAGCTCACCGGCGCCGTGATCAAGCACGCAAGAAGCTTGCTGAAATCTTTGCAAGAATCATAGCTTCTCGCAAAAGCACTGGTAAATCGGAGGATGACATGCTGCAGTGCTTCATCGATTCAAAATACAAAGATGGCCGCCCAACAACAGAAGCCGAAGTGACTGGACTGCTCATTGCTGCTCTTTTCGCAGGGCAGCACACTAGTTCAATTACCTCCACTTGGACTGGAGCATATCTTCTCTCTAACAGCAAGTACCTTTCAGCTGTGGTTGATGAGCAGAAGATTTTGATGGAAAAGCACGGGGATCGAGTTGATCATGATGTCTTGGCCGAAATGGATGTCCTGTATCGGTGCATCAAAGAAGCCTTGAGGCTCCACCCTCCATTGATTATGCTCTTGCGAAGCTCACACACCGATTTCAGCGTCACAACACGAGAGGGGAAAGAATATGATATTCCTAAGGGTCATATAGTTGCCACATCCCCTGCTTTTGCAAACAGGCTGCCTCACATTTTCAAAGATCCCGATACATATGATCCCGATCGATTCACTGTTGGGAGAGAAGAGGACAAGGTGGCAGGGGCTTTCTCATACATTTCTTTCGGAGGGGGCAGACATGGATGCCTTGGCGAGCCCTTTGCATATCTGCAGATAAAAGCAATATGGTCTCACTTGCTAAGGAATTTCGAGCTGGAGTTGGTGTCACCTTTCCCTGAGATTGATTGGAACGCCATGGTTGTTGGAGTGAAAGGAAAAGTGATGGTCCGCTACAAGCGGAGGGAGCTTTCTGTTAGTCACTAG 1467 0.4744 MDIDVSKFFNTCLLFVATIVVAKLISAFIVPKSRKRLPPIVKGLPFIGGLPRFLKGPIFMLREEYPKLGGVFTLKMFHKNITFLIGPEVSAHFFKAPESELSQQEVYQFNVPTFGPGVVFDVDYSVRQEQFRFFTEALRVNKLKSYVDQMVTEAQDYFSKWGESGEVDLKYELEHLIILTASRCLLGREVRDKLFDDVSALFHDLDNGMQPISVLFPYLPIPAHRRRDQARKKLAEIFARIIASRKSTGKSEDDMLQCFIDSKYKDGRPTTEAEVTGLLIAALFAGQHTSSITSTWTGAYLLSNSKYLSAVVDEQKILMEKHGDRVDHDVLAEMDVLYRCIKEALRLHPPLIMLLRSSHTDFSVTTREGKEYDIPKGHIVATSPAFANRLPHIFKDPDTYDPDRFTVGREEDKVAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFELELVSPFPEIDWNAMVVGVKGKVMVRYKRRELSVSH 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00588 488 PRINTS E-class P450 group IV signature 59 82 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g00588 488 PRINTS E-class P450 group IV signature 276 302 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g00588 488 PRINTS E-class P450 group IV signature 334 350 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g00588 488 PRINTS E-class P450 group IV signature 372 386 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g00588 488 PRINTS E-class P450 group IV signature 388 406 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g00588 488 PRINTS E-class P450 group IV signature 414 430 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g00588 488 PRINTS E-class P450 group IV signature 430 448 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g00588 488 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g00588 488 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g00588 488 PRINTS P450 superfamily signature 421 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g00588 488 PRINTS P450 superfamily signature 430 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g00588 488 PANTHER STEROL 14-DEMETHYLASE 10 481 - -
Aip02g00588 488 Pfam Cytochrome P450 38 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g00588 488 PANTHER CYTOCHROME P450 26 10 481 - -
Aip02g00588 488 Gene3D Cytochrome P450 33 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g00588 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 423 432 IPR017972 GO:0005506|GO:0016705
Aip02g00588 488 SUPERFAMILY Cytochrome P450 33 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00588 Aip-Chr2 8802505 8805066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00588 1 485 Miscellaneous Gene Families AT1G11680 81.967 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00588 K05917 - gmx:100810799 880.552