Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00470 ATGGTAGTAGCTGCAGGTTCTAGTGTTGCTAAGCTCAACTTGAGAAAAGGGAAGGGTTCTTCTTATAATGTTATGAGCGGTGGTGATAACAGTGATGGAGATCTTTCCATTGTTAGTAATAACAGTGACAGTGAGTGTTGTTCATCATCAATGGTGGAGGTGGAAAGGGGTCCTTCATGTGTTTCATTCACCACTTTCAATATCTTGGCTCCTATTTACAAAAGGATTGATCCAAAGAACCAAAGCCTCAGGGAAAGTGAGTTCAGGTACTCCTGGTTGTCCAGGAATGAAAGTATTCTGAATTCCTTGCTTGCTGAATCATCTTCCATAATGTGCCTTCAGGAATTTTGGGTTGGAAATGAAGAACTTGTTCACATGTATGAGGAGAAACTAGGGGATGCTGGTTACCATCTCTTCAAGCTTGCTCGAACCAACAACCGGGGAGATGGTCTTCTTACTGCTATACACACAAAATATTTACATGTTGTGAATTATCGGGAGTTGTTTTTAAATGATTTCGGTGATCGTGTTGCTCAGTTGTTACACGTTCAGTCTATTGCCCCTGTTTCGCAAAACCAAATGGGAAGTCTTTACCAAGAGTTTCTTATTGTGAACACACACCTGTTATTTCCTCACGATTCGAGTCTATGTATAGTGAGATTGCATCAGGTTCACCAAATTTTGCAGCATGTGGAATTGTTTCAAAAAGAAAACAGGCTGAAACCGATGCCTATTATACTCTGCGGTGACTGGAATGGAAGTAAGAAAGGGCATGTATACAAGTTTCTTAGGTCACAAGGGTTTGTTTCATCATATGACTGTTATGCAGATTCCCACAAGCAGTGGGTTAGTCACCGAAATCATAGAGGAAATATCTGCGGTGTCGACTTCATTTGGCTTTGCAATCCAAACCAACCACGGAAACCTTTGAAGACAAGTTGGGCTGAAGCTGTTTTTAGCATACTCAAGTACCAGCTACGAAAAGCTTCGCTGTCTGAAGACAGTGCATTTACATTTCTGAAGGGAGACAATTGTGCCGATGCTGTGACATATCTTAGTTTCCATGAGGCACTGCGGCAGGTAAAATTAGTTGATGTGCCTAATGGCTTATGCATTCAGCAGTTCCAAGATCTATGGAATCAAGCAGATGTTGATGGAAATGGGGTCATCGACTTAGAGGAATTCAAGCAAAAGATTTGGAACTCTACATGTCCAGAACCTGTATTGGAAAGCTTCAATGGTTGCATGGAGGATGTGAATGCGACGAATGAGCACGAAACCATCGGCTTTAAGGTGAAGACAGCGATGTTGTTCCCTCGAGAAGTCGAGAGAGGACATTGGCCAGAAGAGTATTCTCTTTCAGATCATGCTAGGCTCACTGCTGTGTTTTCACCAGCAAAGATGAGATGCTATGGATCACAAAAACTATAG 1431 0.4207 MVVAAGSSVAKLNLRKGKGSSYNVMSGGDNSDGDLSIVSNNSDSECCSSSMVEVERGPSCVSFTTFNILAPIYKRIDPKNQSLRESEFRYSWLSRNESILNSLLAESSSIMCLQEFWVGNEELVHMYEEKLGDAGYHLFKLARTNNRGDGLLTAIHTKYLHVVNYRELFLNDFGDRVAQLLHVQSIAPVSQNQMGSLYQEFLIVNTHLLFPHDSSLCIVRLHQVHQILQHVELFQKENRLKPMPIILCGDWNGSKKGHVYKFLRSQGFVSSYDCYADSHKQWVSHRNHRGNICGVDFIWLCNPNQPRKPLKTSWAEAVFSILKYQLRKASLSEDSAFTFLKGDNCADAVTYLSFHEALRQVKLVDVPNGLCIQQFQDLWNQADVDGNGVIDLEEFKQKIWNSTCPEPVLESFNGCMEDVNATNEHETIGFKVKTAMLFPREVERGHWPEEYSLSDHARLTAVFSPAKMRCYGSQKL 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00470 476 Gene3D Endonuclease/exonuclease/phosphatase 41 470 IPR036691 -
Aip02g00470 476 Pfam Endonuclease/Exonuclease/phosphatase family 98 269 IPR005135 GO:0003824
Aip02g00470 476 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 33 471 - -
Aip02g00470 476 ProSiteProfiles EF-hand calcium-binding domain profile. 370 405 IPR002048 GO:0005509
Aip02g00470 476 SUPERFAMILY EF-hand 351 401 IPR011992 -
Aip02g00470 476 SUPERFAMILY DNase I-like 44 273 IPR036691 -
Aip02g00470 476 ProSitePatterns EF-hand calcium-binding domain. 383 395 IPR018247 -
Aip02g00470 476 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 33 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00470 Aip-Chr2 6666559 6671093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00470 126 470 EF-hand Containing Proteins AT1G02270 61.605 1.74e-155 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00470 - - gmx:100777138 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00470 02 6666559 6671093 Aip02g00470 02 6666559 6671093 ECH