Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00440 ATGTCTTTGTCTGCAACCAAGTTCGTGCACCCCATCACAGCTCCTCCCTCTACCAGATCCAGTGACAAGCCTCTCTTTTCCACTTTCTTTGGATCCAATCATACCAAGCTTCGCTTCAATAAACCTATTGTAGCTGCTCAACGCCGTTCTTCATCGGCAGCATCTACGTCTTCGCCTGTTGTTGCTGTCTCCGATGTTGTCAAGGAGAAGAAGCTCAAATCAGCCTCCAATCTGCTAATTACTAAAGAGGAAGGCTTGGTGCTCTATGAAGACATGATATTAGGTAGGTTCTTTGAAGATATGTGTGCCCAGATGTATTATAGGGGCAAGATGTTTGGTTTTGTTCACTTGTACAATGGCCAAGAAGCTGTGTCAACTGGATTCATCAAGTTTCTTAAGAAGGAAGATTATGTGGTGAGTACGTACAGGGACCATGTTCATGCCCTTAGTAAGGGGGTCCCGGCTCGTGAAGTGATGAGTGAACTCTTTGGGAAGGCAACGGGTTGCTGCCGAGGTCAGGGCGGTTCGATGCATATGTTCTCAAAACAGCACAATTTGCTCGGTGGGTTTGCGTTCATTGGTGAAGGAATTCCAGTGGCCACTGGGGCAGCCTTCTCCAGTAAGTACAGAAGGGAGGTGTTGAAAGAACCAGGTGCTGATGAGGTGACATTGGCATTTTTCGGAGATGGGACTTGTAACAATGGACAGTTCTATGAATGCCTTAACATGGCAGCTTTATGGAAATTGCCAATTGTGTTTGTGGTGGAAAACAATTTGTGGGCTATTGGTATGTCACACCTCAGGGCAACTTCTGATCCGCAGATATGGAAGAAGGGACCGGCGTTTGGAATGCCCGGGATCCATGTCGATGGGATGGATGTCTTGAAGGTCAGAGAGGTCGCAAAGGAGGCAATTGAAAGAGCTAGAAGAGGAGAGGGACCTACTTTAGTGGAATGTGAGACTTATAGATTTAGAGGACATTCGTTGGCTGATCCTGATGAGCTTCGTGACCCTGCTGAGAAGGCACACTATGCAGGCAGGGATCCCATCACAGCACTGAAGAAATATCTTTTTGACAACAAGTTAGCCTCTGAACAAGAATTGAAGGCCATAGACAAGAAAATCGAGGAGCTACTTGACGAAGCGGTCGAGTTTGCCGATGAGAGCCCTCTCCCTCCCCGCAGCCAGCTTCTGGAGAACGTATTTGCCGATCCAAAAGGTTTTGGAATTGGACCGGATGGAAAGTATAGATGCGAGGATCCAAAATTCACCCAAGGCACTGCTCATGTTTCTAAGCATTACCGTAGAGCATATGATCTGATAATATGTGATTCGGCTGCATTCAAACATGTCTGCTCATTTGACCACACTTGGATACCTCATCTTCATCAGAAGCAGAAATTCTTTCGGGAAGAGGCTCGTCAGAGGAAATCATTCATCCTACCCAATTCCAAGCGACCTAAAACATCCTCATTGGTACAATCTTGTCCTCTTGATCATGATGCAGAATCCATCACGGAAAAATTAGTTAGAGGGATTTGCAGGCACTCGGACCTGTGGACACCCAAGCAACAACTAATATACCTTGACCTCCTCCTCTCCGAGTACAGCCCTTTCAAGATTATGGATGGTGGAAAGCTGCTGGCTAACCCATGGGACATGCCTCCTCCTTATCCAACAAATTTTGCAATCCTCTCTTCGTCGTCTTCGTCTTCGTCACATCTTATGGCATTCCCTTTGAAGAAATGTGAGCCCTTGGACCTCTATGAGTCCCTTCGGAGTTATGTTGCCCTTAAATACTCTGAGAGCGAGGCAGAGAGAGTAGAAGGCCTTTTCAAAATGGTAGACAAATTGCGCAGTGAAATGCAGCGTGATGACCTCTCTCTACCCATTCGCCGTGACTGCCTCATCCAGTATTTGAAATGCGTTTGCATGATTGAGCCTTTGTTCCCCATGACTACCTCACCCAATCCACCTATCTTTGTTTGGTACAATGCATTCAACCCACAACAGGACTCTTCTCAGCACAACATCCATTTCGAGAAGGCCTCTGTTCTCTTTAACCTGGGAGCCCTCTCCACCCAAGTTGCTCTCTCCTGCGATCTCACCACCATCCAAGGCCATCGCCTTGCCAAGGACGCCTTAAATGATGCTTCACATTGGTTCTCCAAACTGTCGCATGAGGCTGAGAAGGCATCTGCCACCATTGAATTGTCAGTAAACTGTGCCAAGATGCTGCGTGAGATAATATCCGCTCAGATTGCCGACTTGGACTGGAATTTTCCTCATTCCTGTTCTGTTCGATCATCATCATCTCCGGCTCTTCTGCTTTATCAGAAAGCTTTTGATCTGTCGACACTTGAGCCTTTAGCTGAGACTTTTGTTCAATCCTCGATACCTCAATATCTGAAGATGAAAACCTGCCCTGTTGTAACTGATCCAGGTGATATCACTGAACAATTTCTTTCAGGGTATGGTAAGGCTAAATCCCTGCTTGTAGAGGGATGTCAACCACCATGCTTGGATATTAAGGATGGGAATCTTGTGGCCAATGCAACCTTGGAGGCAGTAAGGTTGGCGTTGAAGGAGATGAACTTGCAGGAGTCCAAACCACCACAATAA 2622 0.4668 MSLSATKFVHPITAPPSTRSSDKPLFSTFFGSNHTKLRFNKPIVAAQRRSSSAASTSSPVVAVSDVVKEKKLKSASNLLITKEEGLVLYEDMILGRFFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKFLKKEDYVVSTYRDHVHALSKGVPAREVMSELFGKATGCCRGQGGSMHMFSKQHNLLGGFAFIGEGIPVATGAAFSSKYRREVLKEPGADEVTLAFFGDGTCNNGQFYECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIWKKGPAFGMPGIHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKAHYAGRDPITALKKYLFDNKLASEQELKAIDKKIEELLDEAVEFADESPLPPRSQLLENVFADPKGFGIGPDGKYRCEDPKFTQGTAHVSKHYRRAYDLIICDSAAFKHVCSFDHTWIPHLHQKQKFFREEARQRKSFILPNSKRPKTSSLVQSCPLDHDAESITEKLVRGICRHSDLWTPKQQLIYLDLLLSEYSPFKIMDGGKLLANPWDMPPPYPTNFAILSSSSSSSSHLMAFPLKKCEPLDLYESLRSYVALKYSESEAERVEGLFKMVDKLRSEMQRDDLSLPIRRDCLIQYLKCVCMIEPLFPMTTSPNPPIFVWYNAFNPQQDSSQHNIHFEKASVLFNLGALSTQVALSCDLTTIQGHRLAKDALNDASHWFSKLSHEAEKASATIELSVNCAKMLREIISAQIADLDWNFPHSCSVRSSSSPALLLYQKAFDLSTLEPLAETFVQSSIPQYLKMKTCPVVTDPGDITEQFLSGYGKAKSLLVEGCQPPCLDIKDGNLVANATLEAVRLALKEMNLQESKPPQ 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00440 873 Pfam Dehydrogenase E1 component 93 392 IPR001017 GO:0016624
Aip02g00440 873 Gene3D alix/aip1 like domains 573 760 IPR038499 -
Aip02g00440 873 Gene3D - 42 412 - -
Aip02g00440 873 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA 4 430 - -
Aip02g00440 873 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 83 403 IPR017597 GO:0004739|GO:0006086|GO:0043231
Aip02g00440 873 SMART BRO1_2 574 872 IPR004328 -
Aip02g00440 873 Coils Coil 361 388 - -
Aip02g00440 873 CDD TPP_E1_PDC_ADC_BCADC 88 386 - -
Aip02g00440 873 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 78 405 IPR029061 -
Aip02g00440 873 Pfam BRO1-like domain 576 755 IPR004328 -
Aip02g00440 873 ProSiteProfiles BRO1 domain profile. 574 873 IPR004328 -
Aip02g00440 873 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 4 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00440 Aip-Chr2 6143363 6148729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00440 27 430 Acyl Lipid Metabolism Gene Families AT1G01090 80.941 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00440 K00161 - zju:107423789 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00440 02 6143363 6148729 Aip02g00440 02 6143363 6148729 ECH