Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00439 ATGGAGCTCGACATCCACTCCTTCCTCCCTTCCGACGAAGAAGATGACGCCGCCGATCACCACCGCCGCACCGTCGACGACATCCTCAACGACTGTTCATCTTCCTCTTCTTCTCCCTCTCCTCCTTCTTCGCCTTCCACTTCTTCTTCTAAACCCTTCCACCCGCTGCAAAATTCCCAAACTACCCTTCCGATCCCTCAATCTCATCTTCATCAGTATAATTCAGCAAGACCCGCTTCCTTCTCTCGGGTCAAACCTCATGACCCGTTTTCCAACCGAGTCACGCGCCCGCCGCCGTTTTCCTCGCTGCTGGGCGGTGTTAGGTCTAATGCCAAGCCTGGAGCCGCGCTGGCGGCGGCTGCAGCAGCTTCTAGATCCGTCCCGACGCCGCATGCCGCGGCGATTAAGTCACGGAGGAGTTTGCAGAAGCTCGCGGCGTTGGGAAGTGGGGAATTGAGTAGTTCGATCGGTGGAATTGGCGATGATTCTGATGTTTCTTCTAGAAGTGAGTTGGGAGAGGGGACTAGTGACAGATTCGAGGGGTTTGAGTCTGGTGTGGTTGAGAAATTCGATGAGTTAGAAAGGAAAGTTGAGGATTTTAGGGATCATAGTGAGCGTAGCGATGGTGTTGGTGTTGTTGATACTGAGGTTGATGTTGGTGCTAACATTGGGGTGGAGAATGATTCTGAGAAGAGGGATTTAGATGAGGTTGACAATGAGAATGATGATTCTGAGAAGAATGTAGTTAGTTCTGCACCTTTTGACCATGATGATGATGATGTTGATAAAGAGAACGAGAAGAAAATTGATGCAACTATTATTACTAATGTTGTTGTTGATGATGATCTTGATGTTGGTGAGAAGAGGATAACTGAGGATGGATTGAAGAGTGAGATCATTATGGTAAGAGAAGAGGTAGTGAATGATGGTGCTTTTGTGGAAGAGAGTAAGAGTGAGGTGAATGATATTGTAGGTGATGGTGATGGTGATGATGGTGGTAGTTTGGTAAGTGATAATGTTAGTGAGTTGGTTGAGGAGAGGCTTGAGGAGCTGGAAAGTAAAACGGCTGCTAAGATAGCAGAGAAGAAACTAGAGTCTTTGAAGAAGCCGCTTGAATTGGCGGAAGAATTGGAGAAGAAGCATGCTTCCACTGGTATGCATTTGGAAGAGGGCGCTGCTGCGCAGCCTATGAGACTAGAGGGCATTAGGAGGGGCTCCACAACACTTGGATATTTCGATGTTGATGCAGATAATGCTGTCACTAGGGCCATCTCTTCCCAAGCATTCAGGCGGGAACATGGTTCTGCACAAGTGTTGGCAGCTCATGCCAATTACATTGCAGTAGGAATGGCCAAGGGACTCATTGTTGTAGTGCCAAGCAAGTATTCCATTCATCATGCTGACAGCATTGATGGAAAGATGTTGATGCTTGGTATGCAAGGTGATCGAACACATGCTCCTGTAACATCCATGTCTTTCAACCAGCAAGGAGACCTTCTTTTAGCTGGTTATGGGGATGGTCATGTCACAATTTGGGATGTACAGAAAGGTGTAGTGGCAAAAGTTATTAGTGGAGAGCATACATCACCGGTGGTACATGCATTTTTTCTTGGACAGGATCCTCAGAATACTCGTCAATTTAAAGCCGTCACTGGTGATTGTAAGGGTCTGGTTCTCTTACACAGTATCTCAGTGGTCCCTTTGCTTAATAGGTTCACCATTAAAACTCAGTGTCTTCTTGATGGGCAAAAAACGGGCTTGGTACTGTCAGCTTCACCACTCCTTCCTGATGAATATAGTGGTAGTGCGTCACCTTATTCCCAGGGGAGCACCACAGCCGCAGCCAGCAGTATAAGTAGTATGATGGGAGGTGTTGTTGGAGGAGATGCTCCTTGGAAACTCTTCAACGAAGGCTCTTCTTTGGTTGAAGAAGGTGTCGTTGTATTTGTCACACATCAGACTGCTTTGGTGGTACGACTAAGTCCTACATTGCAAGTTTATGCCCAACTTTCTAGGCCAGATGGAATTCGGGAGGGTTCCATGCCATATACCGCATGGAAATACATGGCACAAACATGTAGTTCTGCTGAAAATACGTCGGCTGATGCTGTTGAAAGAGTATCGTTGCTTGCAATTGCCTGGGAAAGGAAGGTTCAGGTTGCGAAATTGATAAAATCTGAATTGAAAGTATATGGAAAATGGTCTCTTGACAGTGCAGCCATAGGTCTGGCATGGTTAGATGATCAGATGCTGGTAGTTCTCACTTCAACTGGACAAATGTATCTATGTGCCAAGGATGGAACTGTGATTCACCAAACAAGCTTTGGTGTAGACGGTATTGGAGGCGATGATCTGATTTCTTATCATACTCACTTCATCAATATATTTGGAAACCCTGAGAAAGATTATCATAACTCTGTTGCTGTAAGAGGAGCTTCTATTTACATACTTGGTCCGATGCATCTTGTTGTTTCCCGTCTTCTTCCCTGGAAAGAACGTATTCTAGTTTTGCGGAAAGCGGGTGACTGGATGGGTGCCTTGAACATGGCAATGACTCTTTATGATGGCCATGCTCATGGGGTTGTTGACCTTCCTAGAACCTTGGACGCAGTGCATGAGGCCATAATGCCCTTCTTGTTGGAGTTGCTTACATCATATGTTGATGAAGTATTCTCCTATATTTCAGTGGCCTTCTGCAATCAAATTGGAAAACTGGATGAATCGAGTGATTCAAGTAGCAGAAGTAATTCGGTGCATTCTGAGATAAAGGAGCAATACACACGCGTTGGTGGAGTTGCTGTTGAATTCTGTTGTCATATCAAACGGACAGACATCCTTTTTGATAAAATTTTCTCGAAGTTTGTGGATGTTAATGTTCAACAGAGAGAAACATTTTTGGAGCTTCTGGAGCCATATATTTTGAAGGACATGCTTGGATCTCTACCACCGGAGATTATGCAAGAACTGGTAGAGCATTATAGTGCTAAAGGTTGGTTACAGCGGGTTGAGCAATGTGTACTTCACATGGATATTTCATCATTGGATTTTAATCAGGTGGTCAGATTATGCCGGGAGCATGGCCTGTATAGTGCCCTGGTGTATCTCTTTAATAAAGGACTAAATGACTATAGGGCACCTCTGGAGGAGCTCTTTGAAGTCTTACAAAATAGCCAAAAGGATAGTGCTGTTGCACTTGGGTACAGGATGCTGGTTTACCTCAAGTACTGTTTTACAGGTCTTGCTTTTCCACCAGGCCGTGGAACTATTCCTCCTACACGCTTGCAATCTCTTAGAAAGGAACTTGTAGAGTTTTTGTTAGAAGACTCTAATGCTTCGAAATCACAGGCAAAATCAAACTTAGTTGCAAAACAACCCTGTCTGAATGTATATCTTCTCTTAGAGTTGGACACTGAAGCTACATTAGATGTCCTTAGATGTGCGTTTGATGAAGATGAAATTTCAATTACTGGTTCATCTTCACTGAACTCGGTTGATCAATCCATTGAAGAAGCAAAAGAGGAAAATGGTGTTACTGAACATCAAAGTACTTTGGTTCAGAACACAGTAGATGCTCTTGTTAAATTAATTGATATGAAATCTGTTTCACCAGACACGACCTCTACCAGTGGTGATGATGGGTTGAAGTGGCCATTGAAGGACATGGGTTATCTGTTTGAGTTCATTGCCTATTATGTCGCTCTCCAAAGAGCTAAAATCTCAAAGGATGTACTGTGTCAAATATTTGAATATTTGACATCAGAGAGGTACTCTGCAACAAATGTCTTGGTTCATGGTTCAACTCCAAAAAATAGAGAGAAACAAGTGCTTGCACTTTTGGAAATACTGCCTGATTCAGACTGGGATTCATCATATGTACTAGAACTTTGTGAGAGAGCTCAATATCACCAAGTTTGTGGATTTATTCATTCCATTAGACATGAGTATGTGGCTGCACTGGATAGTTACATGAAAGATTTTAATGAGCCTGTTCATGCTTTCTCCTTTATCAACACAATGCTCTCACGGTTGACTAACAACGACCATGCTACTATTCGATCAGACATCATATCTCGAATTCCTGAGTTGGTTGAACTAAAAAGAGTTGGTGATGTGGGTAGCGCTCTTGTACTTACGCTCTCTGATTTGAATGATAAGTTTGTTGAAGTTGATGATGCTGTGGAAGCTGTAGTCTCAAAACGTTCCTTACGTGGTTCTTCCCATACAGAAGTTTTCAACGCTGTCTTAAGAATGAAAGAGGTAAATGACATGCTCAATTTACTACGTGCCTGTATTGGTCTGTGTCAGCGGAACACCCCTCGACTAAATCCTGAGGAGGCAGAAGCTCATTGGTTTAAACTACTTGACTCATTTTGTGAGCCATTTATGGATTCAAATGTTGAAGAGAGAGCATATGAAAGAAAACATTATTTTGGGATGCTAGATGGACCGGAAAATTCACTACTGGATAATGAAAGCTATAAGAGCAGATGGAAAATCTCTAAGTCTCGTAATGGTCATATAATGAGAAAACTGCTAAGCCAGTTTATCAAAGAAATTGTTGAGGGAATGATCGGTTTTGTTCACCTTCCAACTATCATGTCTAAACTGCTTTCTGATAATGGAACTCAAGAATTTGGGGATTTCAAATTTACCATATTGGGCATGCTGGGAATATACGGCTTCGAAAGAAGAATTCTGGATGCCGCGAAATCCTTGATAGAGGATGATACATTTTATACTATGAGTTTACTCAAGAAAGGGGCCTCTCACGGATATGCTCCGAGGACTATACTGTGCTGTATTTGCAATGGCCTGCTTACGAAGAACTCCACTAGCTCTGGAATTCGAATTTTCAACTGCGGTCATGCAAGTCATCTACACTGCGAAGGTTTAGAAATCGAGTCATCAAGAAAAGGATCTATATCTGGATGCCCGGTATGCATGCCTAGCCAGAAACCCCAGCAGTCTAGAAACAAATCAGCCATCGTTGACAATGGCTTGATCAGCAGATTCTCTACAAGACGCCAACCCCCACGTGGAAGCCCCATTCCTCCGCATGAAAATGATTTAGCAGAGAATTCTTATGGACATCAACAGATATCACGGTTTGAGATCTTGAACAGCTTGCAGAAAAATGAGAGATTTATTCAGATAGAAAACTTGCCTCAATTGAGGCTTGCCCCACCTGCTGTATACCATGAAAAGGTAAATAAGGTGATAGATTTTCATGCCGGGGAAAGTAGCAGTAGTAGTTCTGCAGTTTTGGAGAAACAAAGTAGAAACAACAAGCAAAGCCGGGAGCTAAGAGTTAAGGGTTCATCAATCAGATTTCCCTTAAAATCAACTATATTTGGCAAGGAGAAGAATAATAAGAGGTGA 5379 0.4317 MELDIHSFLPSDEEDDAADHHRRTVDDILNDCSSSSSSPSPPSSPSTSSSKPFHPLQNSQTTLPIPQSHLHQYNSARPASFSRVKPHDPFSNRVTRPPPFSSLLGGVRSNAKPGAALAAAAAASRSVPTPHAAAIKSRRSLQKLAALGSGELSSSIGGIGDDSDVSSRSELGEGTSDRFEGFESGVVEKFDELERKVEDFRDHSERSDGVGVVDTEVDVGANIGVENDSEKRDLDEVDNENDDSEKNVVSSAPFDHDDDDVDKENEKKIDATIITNVVVDDDLDVGEKRITEDGLKSEIIMVREEVVNDGAFVEESKSEVNDIVGDGDGDDGGSLVSDNVSELVEERLEELESKTAAKIAEKKLESLKKPLELAEELEKKHASTGMHLEEGAAAQPMRLEGIRRGSTTLGYFDVDADNAVTRAISSQAFRREHGSAQVLAAHANYIAVGMAKGLIVVVPSKYSIHHADSIDGKMLMLGMQGDRTHAPVTSMSFNQQGDLLLAGYGDGHVTIWDVQKGVVAKVISGEHTSPVVHAFFLGQDPQNTRQFKAVTGDCKGLVLLHSISVVPLLNRFTIKTQCLLDGQKTGLVLSASPLLPDEYSGSASPYSQGSTTAAASSISSMMGGVVGGDAPWKLFNEGSSLVEEGVVVFVTHQTALVVRLSPTLQVYAQLSRPDGIREGSMPYTAWKYMAQTCSSAENTSADAVERVSLLAIAWERKVQVAKLIKSELKVYGKWSLDSAAIGLAWLDDQMLVVLTSTGQMYLCAKDGTVIHQTSFGVDGIGGDDLISYHTHFINIFGNPEKDYHNSVAVRGASIYILGPMHLVVSRLLPWKERILVLRKAGDWMGALNMAMTLYDGHAHGVVDLPRTLDAVHEAIMPFLLELLTSYVDEVFSYISVAFCNQIGKLDESSDSSSRSNSVHSEIKEQYTRVGGVAVEFCCHIKRTDILFDKIFSKFVDVNVQQRETFLELLEPYILKDMLGSLPPEIMQELVEHYSAKGWLQRVEQCVLHMDISSLDFNQVVRLCREHGLYSALVYLFNKGLNDYRAPLEELFEVLQNSQKDSAVALGYRMLVYLKYCFTGLAFPPGRGTIPPTRLQSLRKELVEFLLEDSNASKSQAKSNLVAKQPCLNVYLLLELDTEATLDVLRCAFDEDEISITGSSSLNSVDQSIEEAKEENGVTEHQSTLVQNTVDALVKLIDMKSVSPDTTSTSGDDGLKWPLKDMGYLFEFIAYYVALQRAKISKDVLCQIFEYLTSERYSATNVLVHGSTPKNREKQVLALLEILPDSDWDSSYVLELCERAQYHQVCGFIHSIRHEYVAALDSYMKDFNEPVHAFSFINTMLSRLTNNDHATIRSDIISRIPELVELKRVGDVGSALVLTLSDLNDKFVEVDDAVEAVVSKRSLRGSSHTEVFNAVLRMKEVNDMLNLLRACIGLCQRNTPRLNPEEAEAHWFKLLDSFCEPFMDSNVEERAYERKHYFGMLDGPENSLLDNESYKSRWKISKSRNGHIMRKLLSQFIKEIVEGMIGFVHLPTIMSKLLSDNGTQEFGDFKFTILGMLGIYGFERRILDAAKSLIEDDTFYTMSLLKKGASHGYAPRTILCCICNGLLTKNSTSSGIRIFNCGHASHLHCEGLEIESSRKGSISGCPVCMPSQKPQQSRNKSAIVDNGLISRFSTRRQPPRGSPIPPHENDLAENSYGHQQISRFEILNSLQKNERFIQIENLPQLRLAPPAVYHEKVNKVIDFHAGESSSSSSAVLEKQSRNNKQSRELRVKGSSIRFPLKSTIFGKEKNNKR 1792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00439 1792 ProSiteProfiles Zinc finger RING-type profile. 1599 1647 IPR001841 -
Aip02g00439 1792 MobiDBLite consensus disorder prediction 166 183 - -
Aip02g00439 1792 MobiDBLite consensus disorder prediction 1670 1689 - -
Aip02g00439 1792 SUPERFAMILY WD40 repeat-like 441 770 IPR036322 GO:0005515
Aip02g00439 1792 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 481 517 - -
Aip02g00439 1792 PANTHER - 1367 1718 - -
Aip02g00439 1792 PANTHER - 281 1367 - -
Aip02g00439 1792 MobiDBLite consensus disorder prediction 221 261 - -
Aip02g00439 1792 Coils Coil 227 247 - -
Aip02g00439 1792 ProSitePatterns Trp-Asp (WD) repeats signature. 500 514 IPR019775 -
Aip02g00439 1792 ProSiteProfiles Trp-Asp (WD) repeats profile. 488 522 IPR001680 GO:0005515
Aip02g00439 1792 MobiDBLite consensus disorder prediction 1 28 - -
Aip02g00439 1792 CDD RING-H2 1599 1648 - -
Aip02g00439 1792 PANTHER VACUOLAR PROTEIN SORTING VPS41 1367 1718 IPR045111 GO:0006623
Aip02g00439 1792 MobiDBLite consensus disorder prediction 1 109 - -
Aip02g00439 1792 MobiDBLite consensus disorder prediction 150 183 - -
Aip02g00439 1792 MobiDBLite consensus disorder prediction 29 79 - -
Aip02g00439 1792 Coils Coil 341 361 - -
Aip02g00439 1792 MobiDBLite consensus disorder prediction 1747 1773 - -
Aip02g00439 1792 PANTHER VACUOLAR PROTEIN SORTING VPS41 281 1367 IPR045111 GO:0006623
Aip02g00439 1792 MobiDBLite consensus disorder prediction 243 261 - -
Aip02g00439 1792 Pfam Golgi CORVET complex core vacuolar protein 8 964 1148 IPR025941 -
Aip02g00439 1792 Gene3D - 417 563 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00439 Aip-Chr2 6131888 6141258 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00439 K20178 - gmx:100785710 1780.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00439 02 6131888 6141258 Aip02g00439 02 6131888 6141258 ECH