Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00421 ATGTTATTCCCAAGATCAACAATAATAGTTGTACTATTGTTATTTCTCTTAGTCTCTTTGGTTTCTTCTACTCCTCCTGAGGATCCAATCAAATGTTCTTCACCAAACAACACAACATGCACCATCACAAACTCTTATGGGATCTTCCCAGACAGATCCGAGTGCAAAGCATCTCGCGTTGTGTATGCAGCAACAGAGCAAGAGCTCGTGTCAACAATAGCAGAGTTGACGAAGAACAAAACCAAAATGAAAGTAGCAACAAGATTCTCACACAGCATACCAAAGTTGGTATGCCCTGAGGGGCAAAATGGGATTTTAATAAGCACAAAGTACCTAAACAAGATTTTGAAGGTTGATGTGAATGCAAGGACTATAACAGTGGAAAGTGGTGTGACATTGAAGCAATTAATCAATGAAGCTTCTAAATTTGGATTGGTTTTGCCATATACACCATATTGGTGGGGTTTGAGTATTGGTGGACTCATTGGAACAGGTGCTCATGGAAGCACATTGTTTGGGAAAGGAAGTTCAGTTCATGATTATGTTTTGGAGCTTAGGATTGTTGTTCCTTCTTCTTCTCAAGATGGTTTTGCTAGGGTTCTTAGCCTTGATCAACAAAATGAAGATCTCAATGCTGCAAAAGTTTCCCTTGGAGTTCTTGGTGTTATTTCACAGTTAGAACCAATGTTTAAGAGATCAATAACGTATTTGACAAAAGATGATTCGGATTTGGGAGAGAAAGTAGGAACTTTTGGACATGAACATGAATTCGCAGACATGATTTGGTACCCAAGTCAGCATAAGGTTGTGTATCGTGTCGATGATCGTGTCCCTCTCGCCACCTCCGGCAACGGCCTCTATGATTTCATCCCATTCCGCCCCACTTCCTCCGTCGAACTCGCGCTCGTTAGAACCACAGAGGATATCCAAGAATCCACTAGTGATGCCAATGGAAAGTGCTTGCTTGCAAAGACAACAACTAGTACCCTACTCAATGCTGCTTATGGACTCAGTAACAATGGTATAATTTTTACTGGATACCCTGTAATTGGATTTCAAAACCGGCTTCAAGCATCTGGAACATGCTTAGATAGTCTTCAAGATGCAAAGATCACAGCATGTGCATGGGATTCAAGAATCAAAGGAGAGTTTTTTCACCAAACCACATTCAGCATTGGATTATCACAAGCAAAGAATTTCATTGAAGATGTTCAAAAGTTAGTTCAATTAGAACCCAAGGGCTTATGTGGCATGGAAATTTACAACGGTATCCTTATGCGTTATGTCACGGCTTCAAGTGCCTATTTGGGAAAACAAGAGGATGCTATTGACTTTGACATCACTTATTATAGGAGCAAAGACCCTTTTGCCCCTAGGCTCTATGAAGACATTCTTGAAGAGATTGAACAACTTGGGATATTCAAATATGGAGGGTTACCACATTGGGGTAAGAATAGGAACTTGGCATTTGAAGGGGTGATTAAGAGGTACAAGAATTTCCAAAAATTCTTGAAAGTAAAAGAGAGGTATGATCCACAAGGGCTATTCTCTAGTGAGTGGAGTGATCAAGTTCTTGGGATTAAAGGGAGTGTCACAATATTGAAGGATGGTTGTGCTTTGGAAGGTTTATGCATTTGTTCACAAGATAGCCATTGCAATCCAAGCAAAGGGTACTTTTGTAGGCCAGGCAAAGTTTACAAGGAAGCTAGGGTTTGCACTCGCTTGAAATCAACATGA 1737 0.4053 MLFPRSTIIVVLLLFLLVSLVSSTPPEDPIKCSSPNNTTCTITNSYGIFPDRSECKASRVVYAATEQELVSTIAELTKNKTKMKVATRFSHSIPKLVCPEGQNGILISTKYLNKILKVDVNARTITVESGVTLKQLINEASKFGLVLPYTPYWWGLSIGGLIGTGAHGSTLFGKGSSVHDYVLELRIVVPSSSQDGFARVLSLDQQNEDLNAAKVSLGVLGVISQLEPMFKRSITYLTKDDSDLGEKVGTFGHEHEFADMIWYPSQHKVVYRVDDRVPLATSGNGLYDFIPFRPTSSVELALVRTTEDIQESTSDANGKCLLAKTTTSTLLNAAYGLSNNGIIFTGYPVIGFQNRLQASGTCLDSLQDAKITACAWDSRIKGEFFHQTTFSIGLSQAKNFIEDVQKLVQLEPKGLCGMEIYNGILMRYVTASSAYLGKQEDAIDFDITYYRSKDPFAPRLYEDILEEIEQLGIFKYGGLPHWGKNRNLAFEGVIKRYKNFQKFLKVKERYDPQGLFSSEWSDQVLGIKGSVTILKDGCALEGLCICSQDSHCNPSKGYFCRPGKVYKEARVCTRLKST 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00421 578 Gene3D - 386 487 - -
Aip02g00421 578 SUPERFAMILY FAD-binding/transporter-associated domain-like 51 225 IPR036318 GO:0050660
Aip02g00421 578 Pfam D-arabinono-1,4-lactone oxidase 385 523 IPR007173 GO:0003885|GO:0016020
Aip02g00421 578 Pfam FAD binding domain 58 190 IPR006094 GO:0050660
Aip02g00421 578 ProSiteProfiles PCMH-type FAD-binding domain profile. 53 233 IPR016166 GO:0071949
Aip02g00421 578 TIGRFAM pln_FAD_oxido: plant-specific FAD-dependent oxidoreductase 25 573 IPR010030 -
Aip02g00421 578 PANTHER D-ARABINONO-1,4-LACTONE OXIDASE-LIKE PROTEIN 9 575 - -
Aip02g00421 578 PANTHER GULONOLACTONE OXIDASE 9 575 - -
Aip02g00421 578 Gene3D - 115 227 IPR016169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00421 Aip-Chr2 5829556 5836245 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00421 K00103 - gmx:100790483 940.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00421 02 5829556 5836245 Aip02g00421 02 5829556 5836245 ECH