Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00358 ATGGCAAACTTATTAGTCATCTCATTTATGCTTTGTCTAGGTATGTTATCTACTACTATCTACAATGTGAAACTCATTGCTTGTGCAAGTTCCAATGGAATATCAACAAGGTTCTATGATTTCAAGGTACAAACTAAAAGAGTTACCAAACTTTGTAACACCAAGGATATTGTCACAATCAATGGCAAGTTTCCAGGACCTGTAGTTTATGCACAAGAAGATGATAGAATCATAGTCAAAGTTACCAATAAGACACCCTTCAATATCACAATTCACTGGCATGGTATCCGGCAACAGTTATCGTGTTGGTACGATGGGCCGTCCTATATCACGCAGTGCCCGATTCAATCAGGACAAAGTTTCACCTATAATTTTACAGTGGCAAAGCAGAAGGGGACCTTCTTTTGGCATGCACATGTTTCTTGGCTAAGAGGCACAGCTTATGGTGCAATGGTTGTTTATCCTAAGGCCAATGTTCATTACCCTTTTAAGAATCCGTATCAAGAGCACATAATCTTATTAGGAGAATATTGGATAAAGGATCTCCAAGAAATTGAGCATTCAACTCTAGCAAGTGGAGGAGCTCCTCCTAGAGCAGATGCATTCACCATTAATGGTCATCCAGGCCCCAACTATAATTGCTCCACTAATGATGTCTATCAACTTGATGTGGTTCCTAGGAAGACATATTTGTTGAGGCTGATCAATGCTGGTTTAAACACTGAGAATTTCTTTGCCATTGCAAATCACAAACTAACAATTGTGGAAGCCGATGCTGAGTACACGAAGCCGTTCACCACGGACACGGTGATGTTAGGACCAGGCCAAACATTGAATGTCCTTGTCACTGCTGATCAACCCGTAGGGAAATACTCCATGGCTGTGGCGCCTTACAAATCAGGAAGGATTGTTCATTATCAAAACGTTTCAGCAATTGCTTGCTTCAACTATTTAGGAGCTGCATCTGATAGCTTATATTTGCCAGCTAAATTACCCAAACTCGACGACAAACTTGCCGTTAAGACAGTCATGGATGGATTAAGGAGCCTAAACCAAGTCGATGTCTTCAAAGAAATTGATAAAAACCTATTCATCACCATTGGATTGAATGTTCAAAAATGCCATTCAAAGACACCGAAGAAGAACTGCCAAGCCATGAATAATGGGGTGCTGGCAGCTTCGATGAACAACATAAGTTTTGTTAATCCGAATATTTCAATCCTGGAAGCATACTATAAGAATAAAAAAGGATCATATACCGAAGATTTTCCTGACAGACCATCTAAGTTCTACAACTTTGTCAATGGCGCACCTAATAACATTCCACATGACACACAGTCATTGAATGGGACTAGAACAAAGGTCCTTGAGTATGGTAGCAAGGTGCAACTCATTTTCCAGGACACTGGAACAGTAAACATTGAGAACCACCCAATGCATTTCCATGGCCACAGTTTCTATGTTGTAGGCTATGGTACAGGAAATTATAACCCTCAAACTGCGAAATTCAACTTAGTCGATCCTCCATACATGAGCACGATTGGAGTTCCGGTTGGTGGATGGGCAGCAATTCGCTTTGTCGCCAATAATCCAGGCGTCTGGTATATGCATTGCCACATTGATATACACCAATCATGGGGGCTAGGCATGTCCTGCCTCCTATACTCAAAACATGCAATGAATGGTCTAAAGTGA 1695 0.4106 MANLLVISFMLCLGMLSTTIYNVKLIACASSNGISTRFYDFKVQTKRVTKLCNTKDIVTINGKFPGPVVYAQEDDRIIVKVTNKTPFNITIHWHGIRQQLSCWYDGPSYITQCPIQSGQSFTYNFTVAKQKGTFFWHAHVSWLRGTAYGAMVVYPKANVHYPFKNPYQEHIILLGEYWIKDLQEIEHSTLASGGAPPRADAFTINGHPGPNYNCSTNDVYQLDVVPRKTYLLRLINAGLNTENFFAIANHKLTIVEADAEYTKPFTTDTVMLGPGQTLNVLVTADQPVGKYSMAVAPYKSGRIVHYQNVSAIACFNYLGAASDSLYLPAKLPKLDDKLAVKTVMDGLRSLNQVDVFKEIDKNLFITIGLNVQKCHSKTPKKNCQAMNNGVLAASMNNISFVNPNISILEAYYKNKKGSYTEDFPDRPSKFYNFVNGAPNNIPHDTQSLNGTRTKVLEYGSKVQLIFQDTGTVNIENHPMHFHGHSFYVVGYGTGNYNPQTAKFNLVDPPYMSTIGVPVGGWAAIRFVANNPGVWYMHCHIDIHQSWGLGMSCLLYSKHAMNGLK 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00358 564 TIGRFAM laccase: laccase 36 554 IPR017761 GO:0046274|GO:0048046|GO:0052716
Aip02g00358 564 SUPERFAMILY Cupredoxins 36 178 IPR008972 -
Aip02g00358 564 SUPERFAMILY Cupredoxins 163 300 IPR008972 -
Aip02g00358 564 CDD CuRO_2_LCC_plant 170 317 IPR034285 -
Aip02g00358 564 CDD CuRO_1_LCC_plant 39 155 IPR034288 GO:0005507
Aip02g00358 564 PANTHER LACCASE-6 19 556 - -
Aip02g00358 564 Gene3D - 167 352 IPR008972 -
Aip02g00358 564 SUPERFAMILY Cupredoxins 357 550 IPR008972 -
Aip02g00358 564 PANTHER MULTI-COPPER OXIDASE 19 556 IPR045087 -
Aip02g00358 564 Pfam Multicopper oxidase 443 552 IPR011706 GO:0005507|GO:0016491
Aip02g00358 564 Gene3D - 372 559 IPR008972 -
Aip02g00358 564 Gene3D - 23 155 IPR008972 -
Aip02g00358 564 CDD CuRO_3_LCC_plant 419 550 IPR034289 GO:0005507
Aip02g00358 564 Pfam Multicopper oxidase 43 157 IPR011707 GO:0005507
Aip02g00358 564 ProSitePatterns Multicopper oxidases signature 2. 537 548 IPR002355 GO:0005507
Aip02g00358 564 Pfam Multicopper oxidase 169 319 IPR001117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00358 Aip-Chr2 4767970 4770833 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00358 K05909 - gmx:100789406 967.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00358 02 4767970 4770833 Aip02g00358 02 4767970 4770833 ECH