Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00356 ATGAATCAAAGAAATTCTTCTTCTATTAACCCCATCGATCACTTGCCACTCCAACTCCACCGATCCGACGTCGTTCCACCGTCACCTTCCCCTACTTCCGCCATCGATTTCCTCCCCGATTTCGCCGGATACTCATGGATCGCTTACGCTGCTTCCTCTCTCCTTTCCATCACTCACTTCCCTTCTCCTCTCTCTCACAAACAGACTCGCATCGGTTCCATTTTCCGCCAACTCTTCGAGCTCTCCGGCGACCCTTCTTCCTTTGTCTCCGCCGTCTCATGGTGCCCCCGGACCCCTTCCTCCGGTGAACTCGCTGCTTCAGCTCAAAATTGCATCTGGGTCTTTCACCATCGATCTGCTACCTCAAAAGGTTCTTTTTGTTGGAGCCAGAATGCAGTGCTTGTACAACAAACGAAGGTGGAGGCCATCAAATGGACAGAATCAGGGGATGGAATAGTTTCCGGCGGAAGCGAGGTGGTTTTCTGGAAAGAGAGTAATAAGCGTTGGGAAATAGCTTGGAAGTTCAAAGTGGATCAACCTCAAACTCTTGTTTGCACAACCTGGTCTATTGAGGGCCCTTCGGCAACCACGGCACATCATGGTAAAGGACAAGTTGAGGGGTCATTAGCAAATCAGGCAAGCAAATGTGTCTTGGTAATTCAAAACAATGGACAATCTGAATATTCAACAGCCAATCTACGGCATCCTCTACCTGTCGTAATGATTCAGTGGAGACCGCCAAGAAGAAGGCTATCAAACGGATATGAGGGGCATTCAGTTAGGCATGTATTATTGACCTGCTGCTTAGATGGAACTGCAAGGCTATGGAGCGAGATTGATCATGGGAAGGCTAGAAGGAATGCGAAGGATACCAATGATCTAAAGATCACGGAACGCTCTTTTTGTGTTGTTGGTGTAATTGAGATTAATCAAGCCTTGAATGGAACCCTAGGTTCAAATATATTTGTATCATGGGGAAGAGAAATGGAGGGAATATTTAAAATCGGTGAAGGAGTGAAGCAAGATTTCTCCAAAGAAAGATTCAAGGACGATGTTAGAAATTGTGAATGGCTAATAGGTTTTGGTCCTGGAATGTTGCTAAGCTTTTGGGCTGTCCACTGTCTTGATGACATTTCGCCACTTAGATTTCCTCGAATTACATTATGGAGGAAACATGAATTCCAGGCCAATGACATAGGAAGCACTCATAAGTTTGATTCATCTGATTTTAAAAATGCATTACTTCTGCATAAAGTCAGTATATTGAGGAACTGCTTGTCTGGTCCACCTATAGTCTGCTCTCCACTCCAGTTATTACATTGCAATTCTTTAGTTTGGTCATATTTGCGTATTCAAGCAATAGACGATACTGTTGAGACCTCCCTTGATAAAGCCAAAACGGATTACATCTCCAATTTGAGTGGTGGAGTTTTAAACTTAGATGGTCACAGTGAGAAAATTTTAAAGGTTTCAATTCATCCTCATATATGCGAAGTTCAATTTGCTGCTTCTCTTGATAAGAATGGGCTGATTCTTTTTTGGTCACTTTCTAACATTTCAAACTGCATTTTGAAATGTCCAACTTTGGTTCCTTCTTGGGAACTTTGTGGGAAGCTTGTAACTCAAGGCTCATGCTCGAAGTATACAAGTTTGAGGTGGGCACCTTCAGTACTTAATGACAACCTGGTTTTATTTATGGGACATGCCAGGGGGGTTGATTGCTTCATAGTCAATATTTGTCGAACTGAAGAAGAAAATGTAGAATGCCACTACTTATGCACTATTCCTTTTAATGGTCATGGTCCTTTTAAGCATGGCCCATCTGATATATTTGCAATTCCTTTGAACTCGACTTGTAATAAAACGTTTCATAATAATAAAATTATGCTATTGGCAATTTGGATAGGGAGATTCCAGGCCTTATCATGGGAAGTTAACTTACACTCATTCGATATGTCAACAAGCTGTTGTGCATGTGGTATTGATGCTAAAATCCCCGATAATGGTGATATTTGGGCATTTGAAAGTACATTTGCTAATAAAAGATATTTCATTGCTGTAAATCCTTGTTCTTCTGAGTATCCAACGCCTGATGATCTAGTTACCAGCTTTGCTGTGGTTGATGCAGTCACTCTAAGCCACAGACAGCAGGAGTTAGGCTTTGCAGATGATCTATGTAGTGGTTATCCTGCATCTATTATGGCCACGGGTTGTTCCAATGGTAGCTTGAAACTTTGGAGAAGTAACTGTGGCAACCGATCAGCTCTGCACTTGCCATGGGAGCTTGTGGGTATGTTTACTGCACATGATGGTCCGGTCAATCATATATGTTTCACTGATTGTGGTCAGAAGATAGCTACTTGCTGCAACAGAAGAGATTCAAATGGCGTCAATACCATTCATATATGGGATGCTGTAAACCTGATCAGTGAAGGGACTTTTATTTTGGAAGACAGGCTAACTTTTGAAAGTAATATTTGTAGTCTAAATTGGTTAACTTTAGGTACTGGTCAGTTGCTGCTTGGAGTTTGCTTGGAAAATGAATTACAAGTTTTTGCGCAGAGGCGTTTTGATGGTATGACTTTGTCAAACTCTGTAAAGTTTCCGAAGATTAATATATGGATTAATATTGCATTTGCTCAGACTTCCCTTCCAATTCGTGATTTCTTGTGGGGTCCCAGAGCTACAGCAGTGGTAGTTCATGAAAATTACTTTAGTATATTTGGTCACTGGTTGTTTCACGAGGATAGAAAACAAGGGAGTAATTTTCATTTCCGTGATTCCAAGCCAAATGCCGCTAATTGCAAGGGTGAAATATATGAAGACGGACCTACAGTTCTTACCGATTGTGACTCCATGCAGTCCTCCAATATTAATATGAGGGATGATAACCGATCAAGTAGCTTATGTCTGGCCAAGAAGCAATTGAAGTCTGAAATTTGCACGAACATTGGCTTATGGAGCATCTTAGAAGTAGCTGAGACAATTAGTAGGCCTTTGCCTACATATCACCCCGATATTCTCCTCACTAATATAAGTTCAGGAAATTGGAAACGTGCTTATGTAGCTGTGAAACATTTTGTTGAATATTTGACTTCTAATAATGATCCTAAAATAAGGTTCGTCTCCAAAAATAAGGGTCTTCCAGAGATGAGTTTGTCATACTATCTAGAAGGAAGCCTGTCAGAAGGTTCCCAAGACAGGAGATTCCAATGGAGTGGAGATATTGCGTCAATCACGTCAACTTCTCACATGGAAAGTAGCATTTCTACCTCAACAAAGTCTGAGCTTAATGGCTTTGTTGAATCCATTGAGAATTCGCCCGAGTTATTGCATTTGACCAATGTAGAGAAGTCAGAGATTCTTGCAATCATTGATTTGCTTGGCGAAGTTTGTAGTCCACACTTGTCTTCTGCATACCAAAGTCTTGATGAACCTGGCAGGAGGTTCTGGGTTGCGTTGAGGTTTCAGCAACTGTTTTTTCACCGAAAGTTTGCTAGAGCTGCGTCTTTCGAAGAATTGAATGTTAATTCAAGGTTGTTTGTGTGGGCTTACCACTCTGATTCCCTAGAAAATTTATTTGGTTCTGTCATACCCAGTGAACCATCATGGCAAGAAATCCGTGCTTTGGGTGTGGGCTTTTGGTATGCTAGTATGGAGAAATTGGCAAGAGCTCAATATTTGAAAAACAAGAATCCTAGGGATTGTGCACTGCTATATATTGCACTAAACCGAATTCAAGTTTTGGCTGGCCTTTTCAAACTCAGTAAGGATGAGAAAGACAAGCCTTTAGTGGCCTTTCTTTCGCGTAATTTTCAGGATGAGAAAAATAAAGCTGCTGCTTTGAAAAATGCATATGTGTTGTTGGGAAAGCATCAGGTGGAATTAGCTATCTCGTTTTTTTTGCTCGGAGGTGATCATTCTTCTGCTGTAAATATTTGTGCTAAGAACCTTGGGGATGAACAACTTGCACTAGTTATTTGTCGCCTTGTTGAGGGCCATGGTGGACCATTGGAGCGTCACTTAATAACAAAGTATATACTTCCTTCTGCAATTGAAAAGGGAGACTACTGGCTTGCAAGCCTTCTGGAGTGGGAAATGGGTAATTATTATCAATCTTTTCATAGAATGCTAGAGTTTTCAATAACTCTGGTGGCTCAGGAGTCCACTGTCATGTCCAATTGTGGTCCTTTTCTGGATCCAAGTGTTGGTACTTTTTGCCATATGTTAGCAACAAAGAATAGCCTCAGGAATGCTGTCGGGGAGCAAAATTCAGCAATTCTTTTAAGATGGGCTACTTTGATGACAGTTACTTCCCTAAAACGATGTGGCAATGTTGTTGAGGCATTGGAATGTTTCTCATCTTCAATGAGCATGCATGGGACAGCAGATCAAGGGAGCGATTTGAATGTCAGCCATAATGTGCTTTCCAGTCCATTAAAGCCTTTGCCAAGAAAATCTTCTAACTGGTTGTCCTCCGATGTGTCTGTTCATCTGGAGTTCCATAAGAAATTGAATTTGGCACTACGCTACTTACTGAAATTGATAAGAGAGCATCCAAGTTGGCTTGAGACTTTCACTGAACCTGTTGGGGAAGCTTCTTATGATGATGAATGTATGATACAATATGAGAAATCAGTTGAAAGTTTTAAGCAAAAGTTATGCACAGGGATTTCTCTATATGAACGGAGGTTTTTGTTGCCTCCTAGGTCTCTTATCAGTAAGATTTTACTCTTTCTATGCCATCATGGATTATTGTACATTGGGTATGATATCGCCGATGGATGCGCTCGAGGAGAACTATCTCAAAAGAAGAGTGATGTGTCTGATGCTTTCAGTTTATATCGCTGTCAGGTTAAACCCTTCTTTAAGACTGTAGAAGAAATCTCCTTTTTCTACTCAAGATTCATTTCTGCCTGCAGCATGGGATATTCTGAACAAAGTTCTACTTCTATTGAGAAAGTTGCATCTACGGAGAGTCGATCTATGTTTTCTGATGCTTCGAAGTCTCACTTTGGAGGTGTTCTGATTTCATTATGGTATTTAAGAGCCATTTTCAAGATCGAATTGCGGTCCATCAGCATAGATCATGTCAAAGAACATCTAGATATCCTTGATTTATTTGAGTACTTTTTACAGTTTTCCTTAGCTTGGCTTCAAAGAAACTCAGGAGCACTTTTATTTATGGTGGAACCATTCTTGACTGCAAATGCTAATGGTTGTAATCATTATGAGGCTGATATGGTGAATCTGAAGAACCGTTTTCCCAAATTTGCAGAGTTGTTGACTCGAAATTCATTCACAACAAATGTACAAAACCTCCAAGTCTCTGAATGTACAGAAGATGGAAAAGTTGATGACACAAAGCATTCAATTCCAGAAGATGAAAGATGGAAGATTCTAGGGATCTGCTTGTGGCGACATATGTCTAGATTTATGATATCTAATTTAAATTTGGTTCTTGATAAACTTGAAGATGGTAACAGTTCAGGTTCTTTCCACAGAAATTTTGCTCATAGGGAGTTCACGCTCTTAAGTGTTGATTCCGATAGCATCAGCTTGCCTGAACAGATTCGATTACTCTCGTTTAGCTTATGTGATTTACTGACAACAACAGTTACCCACATTTCTTCTTACCATGTCAAGCAACTTGCAGAATATTTGTGGCAGAAATTGGAGAATAATTCGACTGTGATGACTCTTGAATGGCTGAAACAACCACGTCAATCAGAATCCAGTCAAAAACAAAACCTGGACATCTTGGAACTGGTGAATGGGAAAGATGAATGTTCAGTTCATCAGTTACTGTGGGACCACTGTGCCGATCAAAAATTAATATCGGAATGCTTTGCTCAGGAAAAACTCAATTGGTCAAATTATTTGGATCATGTGCCTACTAAAGGATGGAACGACATGCATATACTTCTGACAGGGCAACATAAAACTGATGACATGCGTGATAAAGAATCTAAACTTGGCATTCCATTACAAACTCCTGAAGCATTGTGTATAAACTCTACTGATCAACAGGAAGCTGCAGTTGCTAGCAACCGGAAGGGTATAGTATTCTTCCGTATGGAAGATGGGATGCCTTCAAGTGATAAGTCATCAGACTTCTTGTGGGCCAAGGCTGATTGGCCACAAGATGGGTGGGCAGGTTCGGAATCTACTCCTGCTCCTACATGTGTTTCGCCTGGTGTTGGTCTTGGCAACAACAAAGGCGCACACCTTGGGCTCGGTGGAGCAACTGTTGGCGTAGGTTCTTCAGTTTGGCCTAGCAAAGACTTTACTGGTGGTGGAGCATTAGGAGTTAAAGGTTTTGCTGGTATTGGTGCCTATGGATTAGGTTGGGGAATTCAACAAGATTTTGAAGATGTTGTTGATCCACCTGCGACTATGGAGAACGTAACTACGAAGGCTTTGTCTAGTCATCCGATGAGACCTTTCTTCTTGGTTGGCTCAAGCAATACACACATTTATTTGTGGGAGTTCAATAAGAACAAAGCTATGGCTACATATGGAGTGCTACCCGCCGCCAATGTACCTCCACCTTATGCCCTTGCATCAATATCAGCTTTGAAGTTTGATCACTTCGGACATCGGTTCGCTAGTGCTGCATTAGATGGAACTGTCTGTACGTGGCAATTGGAGGTAGGAGGAAGGAGCAATGTTCATCCAACAGAATCATCACTCTGCTTTAGCGGTCATGCGTCGGATGTCGCCTACTTGTCTTCAAGTGGATCAATTATAGCTGTAGCTGGGTATAGCTCTAATGCTGTTAATGTGGTTATATGGGACACTTTAGCTCCACCAACAACTTCCCGTGCTTCGATTCTATGTCATGAAGGTGGTGCGCACTCCCTTTCTGTTTTCGATAGCCATGTAGGCGGCGGTTCTGTTTCCCCAATTATCGTGACTGGTGGTAAAGGTGGTGATGTTGGTCTCCACGACTTCCGCTATATAGCGACTGGAAAGACGAAAAGGCACAGGCGTATTGATACTATGGGGCATAGCCCTACTGCGTCTTCGACTCATGATAAGGACCAGAAAACAGATGGTATGCTTTGGTATATTCCAAAGGCTCACTCAGGGACTGTTACAAAAGTCGTTACCATCCCGAATACAAGTTTGTTTCTAACTGGAGGCACAGATGGAGATGTCAAACTCTGGGATGCTCAGAACACAAAGTTAGTACATCATTGGTCCAGGATACATGATAAGCACACCTTCGTGCAGCCGAGTTCCCGTGGATTTGGTGGTGTTGTTCGGGCTGCTGTTACGGATATACAAGTTGTTTCGCAAGGTTTCCTCTCGTGTGGTGGGGATGGAACTGTGAAGTTGCTACGGCTCAGCGGTCACCTTGATAGCCATGGAATTGTTGAAGCAGCCATCGATTTTGAACAGGATAGTTCATCACTACGTCCGCGTCCACGTCCACGTGTTGAAGAGGTTCCATTTGCAGGGTGA 7467 0.4189 MNQRNSSSINPIDHLPLQLHRSDVVPPSPSPTSAIDFLPDFAGYSWIAYAASSLLSITHFPSPLSHKQTRIGSIFRQLFELSGDPSSFVSAVSWCPRTPSSGELAASAQNCIWVFHHRSATSKGSFCWSQNAVLVQQTKVEAIKWTESGDGIVSGGSEVVFWKESNKRWEIAWKFKVDQPQTLVCTTWSIEGPSATTAHHGKGQVEGSLANQASKCVLVIQNNGQSEYSTANLRHPLPVVMIQWRPPRRRLSNGYEGHSVRHVLLTCCLDGTARLWSEIDHGKARRNAKDTNDLKITERSFCVVGVIEINQALNGTLGSNIFVSWGREMEGIFKIGEGVKQDFSKERFKDDVRNCEWLIGFGPGMLLSFWAVHCLDDISPLRFPRITLWRKHEFQANDIGSTHKFDSSDFKNALLLHKVSILRNCLSGPPIVCSPLQLLHCNSLVWSYLRIQAIDDTVETSLDKAKTDYISNLSGGVLNLDGHSEKILKVSIHPHICEVQFAASLDKNGLILFWSLSNISNCILKCPTLVPSWELCGKLVTQGSCSKYTSLRWAPSVLNDNLVLFMGHARGVDCFIVNICRTEEENVECHYLCTIPFNGHGPFKHGPSDIFAIPLNSTCNKTFHNNKIMLLAIWIGRFQALSWEVNLHSFDMSTSCCACGIDAKIPDNGDIWAFESTFANKRYFIAVNPCSSEYPTPDDLVTSFAVVDAVTLSHRQQELGFADDLCSGYPASIMATGCSNGSLKLWRSNCGNRSALHLPWELVGMFTAHDGPVNHICFTDCGQKIATCCNRRDSNGVNTIHIWDAVNLISEGTFILEDRLTFESNICSLNWLTLGTGQLLLGVCLENELQVFAQRRFDGMTLSNSVKFPKINIWINIAFAQTSLPIRDFLWGPRATAVVVHENYFSIFGHWLFHEDRKQGSNFHFRDSKPNAANCKGEIYEDGPTVLTDCDSMQSSNINMRDDNRSSSLCLAKKQLKSEICTNIGLWSILEVAETISRPLPTYHPDILLTNISSGNWKRAYVAVKHFVEYLTSNNDPKIRFVSKNKGLPEMSLSYYLEGSLSEGSQDRRFQWSGDIASITSTSHMESSISTSTKSELNGFVESIENSPELLHLTNVEKSEILAIIDLLGEVCSPHLSSAYQSLDEPGRRFWVALRFQQLFFHRKFARAASFEELNVNSRLFVWAYHSDSLENLFGSVIPSEPSWQEIRALGVGFWYASMEKLARAQYLKNKNPRDCALLYIALNRIQVLAGLFKLSKDEKDKPLVAFLSRNFQDEKNKAAALKNAYVLLGKHQVELAISFFLLGGDHSSAVNICAKNLGDEQLALVICRLVEGHGGPLERHLITKYILPSAIEKGDYWLASLLEWEMGNYYQSFHRMLEFSITLVAQESTVMSNCGPFLDPSVGTFCHMLATKNSLRNAVGEQNSAILLRWATLMTVTSLKRCGNVVEALECFSSSMSMHGTADQGSDLNVSHNVLSSPLKPLPRKSSNWLSSDVSVHLEFHKKLNLALRYLLKLIREHPSWLETFTEPVGEASYDDECMIQYEKSVESFKQKLCTGISLYERRFLLPPRSLISKILLFLCHHGLLYIGYDIADGCARGELSQKKSDVSDAFSLYRCQVKPFFKTVEEISFFYSRFISACSMGYSEQSSTSIEKVASTESRSMFSDASKSHFGGVLISLWYLRAIFKIELRSISIDHVKEHLDILDLFEYFLQFSLAWLQRNSGALLFMVEPFLTANANGCNHYEADMVNLKNRFPKFAELLTRNSFTTNVQNLQVSECTEDGKVDDTKHSIPEDERWKILGICLWRHMSRFMISNLNLVLDKLEDGNSSGSFHRNFAHREFTLLSVDSDSISLPEQIRLLSFSLCDLLTTTVTHISSYHVKQLAEYLWQKLENNSTVMTLEWLKQPRQSESSQKQNLDILELVNGKDECSVHQLLWDHCADQKLISECFAQEKLNWSNYLDHVPTKGWNDMHILLTGQHKTDDMRDKESKLGIPLQTPEALCINSTDQQEAAVASNRKGIVFFRMEDGMPSSDKSSDFLWAKADWPQDGWAGSESTPAPTCVSPGVGLGNNKGAHLGLGGATVGVGSSVWPSKDFTGGGALGVKGFAGIGAYGLGWGIQQDFEDVVDPPATMENVTTKALSSHPMRPFFLVGSSNTHIYLWEFNKNKAMATYGVLPAANVPPPYALASISALKFDHFGHRFASAALDGTVCTWQLEVGGRSNVHPTESSLCFSGHASDVAYLSSSGSIIAVAGYSSNAVNVVIWDTLAPPTTSRASILCHEGGAHSLSVFDSHVGGGSVSPIIVTGGKGGDVGLHDFRYIATGKTKRHRRIDTMGHSPTASSTHDKDQKTDGMLWYIPKAHSGTVTKVVTIPNTSLFLTGGTDGDVKLWDAQNTKLVHHWSRIHDKHTFVQPSSRGFGGVVRAAVTDIQVVSQGFLSCGGDGTVKLLRLSGHLDSHGIVEAAIDFEQDSSSLRPRPRPRVEEVPFAG 2488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00356 2488 MobiDBLite consensus disorder prediction 2329 2348 - -
Aip02g00356 2488 SUPERFAMILY WD40 repeat-like 78 847 IPR036322 GO:0005515
Aip02g00356 2488 PANTHER RABCONNECTIN-RELATED 20 2449 - -
Aip02g00356 2488 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 2359 2394 - -
Aip02g00356 2488 PANTHER RABCONNECTIN-3A 20 2449 - -
Aip02g00356 2488 Coils Coil 1265 1285 - -
Aip02g00356 2488 Pfam RAVE protein 1 C terminal 798 1392 IPR022033 -
Aip02g00356 2488 Gene3D - 706 866 IPR015943 GO:0005515
Aip02g00356 2488 Gene3D - 2132 2436 IPR015943 GO:0005515
Aip02g00356 2488 ProSiteProfiles Trp-Asp (WD) repeats profile. 2359 2400 IPR001680 GO:0005515
Aip02g00356 2488 SUPERFAMILY WD40 repeat-like 2140 2447 IPR036322 GO:0005515
Aip02g00356 2488 Pfam WD domain, G-beta repeat 255 277 IPR001680 GO:0005515
Aip02g00356 2488 Pfam WD domain, G-beta repeat 2359 2391 IPR001680 GO:0005515
Aip02g00356 2488 Gene3D - 29 572 IPR015943 GO:0005515
Aip02g00356 2488 SMART WD40_4 697 747 IPR001680 GO:0005515
Aip02g00356 2488 SMART WD40_4 2126 2163 IPR001680 GO:0005515
Aip02g00356 2488 SMART WD40_4 2271 2317 IPR001680 GO:0005515
Aip02g00356 2488 SMART WD40_4 473 515 IPR001680 GO:0005515
Aip02g00356 2488 SMART WD40_4 2226 2266 IPR001680 GO:0005515
Aip02g00356 2488 SMART WD40_4 226 277 IPR001680 GO:0005515
Aip02g00356 2488 SMART WD40_4 2403 2449 IPR001680 GO:0005515
Aip02g00356 2488 SMART WD40_4 759 804 IPR001680 GO:0005515
Aip02g00356 2488 SMART WD40_4 2352 2391 IPR001680 GO:0005515
Aip02g00356 2488 SMART WD40_4 74 116 IPR001680 GO:0005515
Aip02g00356 2488 SMART WD40_4 2180 2215 IPR001680 GO:0005515
Aip02g00356 2488 SMART WD40_4 130 163 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00356 K24155 - gmx:100789935 3601.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00356 02 4734461 4747164 Aip02g00356 02 4734461 4747164 ECH