Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00334 ATGGAGAATCTGATACAGCTTGTGAACAAGATACAGAGAGCATGCACCGCCCTCGGCGACCACGGCGAGGACGGCAAAGAAGGTGCCGTTCCCACTCTCTGGGACGCCCTTCCCTCTATCGCCGTCGTCGGCGGCCAGAGCTCTGGAAAATCTTCGGTGTTGGAGAGTATTGTCGGAAAGGACTTTTTGCCTCGTGGATCTGGTATCGTAACTCGGCGTCCTCTTGTTTTGCAACTTCATAAGATTGATGAAGGGAGGGAGTATGCAGAGTTTATGCATCTTCCAAGGAAGAAGTTTACTGATTTTGCTGCCGTTAGGCAAGAGATCTCTGATGAGACTGACAGAGAAACTGGTCGAACCAAGGGCATTTCTTCTGTTCCTATCCATCTTAGTATCTACTCCCCTCATGTTGTTAATCTAACACTAGTTGATCTTCCTGGACTTACAAAAGTCGCCGTTGATGGTCAACCAGATAGCATTGTGCAAGACATTGAAAATATGGTTCGGGCTTTTATCGAAAAGCCAAATTGCATCATTTTGGCAATATCTCCGGCTAATCAAGATCTTGCTACCTCAGATGCAATTAAGATTTCCCGTGAAGTAGACCCTAAAGGGGAAAGGACATTTGGAGTTTTGACAAAGATTGATCTTATGGACAAGGGTACGGATGCCGTGGATATCCTTGAAGGGAAAGCATATAAGCTAAATTTCCCTTGGATTGGTGTTGTCAATCGCTCCCAAGCAGATATCAACAAAAATGTTGATATGATTGCTGCTCGACGTAGAGAGCAAGAGTATTTTGAAACTACTCCAGAATATAGACATCTCGCAAGCAGAATGGGCTCAGTGCATCTAGGAAAGGTGCTATCTAAGCATTTGGAAACTGTCATAAAGTCTCGGATCCCAGGCCTTCAGTCACTAATTAGTAAGACAATCATGGATTTGGAAATGGAACTAAATCGCATTGGGAAACCTATTGCTGCAGATACTGGAGGGAAGTTGTACACGGTAATGGAAATCTGTCGAAGTTTTGATCAGATATTTAAAGATCATCTTGATGGAATACGCCCTGGTGGTGATAAAATTTACCAAGTATTTGACAATCAGTTTCCAGCAGCTCTTAAAAGGCTACACTTTGACAAACATCTTTCAATGGACACGGTGCGAAAACTAATAACTGAAGCAGATGGATATCAACCTCACCTCATCGCTCCTGAGCAAGGATACCGCCGTCTTATTGAATCTTGTGTAGTATCTATTAGGGGCCCTGCTGAAGCAGCTGTTGATATGGTTCATGGAATTTTGAAGGATCTGATCAAGACATCTATGAGTGAAACCCTGGAACTAAAGCAATATCCCACCCTTAAAGTAGAACTTGGAGCTGCAGCCAATGAATCATTGGAGAGGATGAGAGAAGAAAGTAAGAGAGCAACTCTGCAATTGGTAGACATGGAATGTGCTTATTTAACTATCGACTTTTTCCGCAAACTTCCTCAAGATGCCGAGAAGGGTGGAAATCCAACTCACTCGCTTTTCGACAGATACAGCGATGCTTATCTTCGTCGAATTGCAACCACTGTATTGTCCTACGTGAACATGGTATGTGCAAGCCTCAGGAATACTATTCCCAAGTCTGTAGTTTATTGTCAAGTACGCGAGGCTAAACGCAGCTTACTCGATCATTTCTTCACAGAGTTGGGGAAGAAGGATGGAAAACAACTATCTGCGTTGCTGAATGAGGATCCGGCAGTGATGCAGCGCAGAACCTCGCTCGCAAGAAGGCTAGAGCTATACAGAAATGCCCAAGCAGAAATTGAAGCTGTTGCATGGGATAAGTAG 1839 0.4405 MENLIQLVNKIQRACTALGDHGEDGKEGAVPTLWDALPSIAVVGGQSSGKSSVLESIVGKDFLPRGSGIVTRRPLVLQLHKIDEGREYAEFMHLPRKKFTDFAAVRQEISDETDRETGRTKGISSVPIHLSIYSPHVVNLTLVDLPGLTKVAVDGQPDSIVQDIENMVRAFIEKPNCIILAISPANQDLATSDAIKISREVDPKGERTFGVLTKIDLMDKGTDAVDILEGKAYKLNFPWIGVVNRSQADINKNVDMIAARRREQEYFETTPEYRHLASRMGSVHLGKVLSKHLETVIKSRIPGLQSLISKTIMDLEMELNRIGKPIAADTGGKLYTVMEICRSFDQIFKDHLDGIRPGGDKIYQVFDNQFPAALKRLHFDKHLSMDTVRKLITEADGYQPHLIAPEQGYRRLIESCVVSIRGPAEAAVDMVHGILKDLIKTSMSETLELKQYPTLKVELGAAANESLERMREESKRATLQLVDMECAYLTIDFFRKLPQDAEKGGNPTHSLFDRYSDAYLRRIATTVLSYVNMVCASLRNTIPKSVVYCQVREAKRSLLDHFFTELGKKDGKQLSALLNEDPAVMQRRTSLARRLELYRNAQAEIEAVAWDK 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00334 612 PRINTS Dynamin signature 37 55 IPR022812 -
Aip02g00334 612 PRINTS Dynamin signature 62 79 IPR022812 -
Aip02g00334 612 PRINTS Dynamin signature 134 151 IPR022812 -
Aip02g00334 612 PRINTS Dynamin signature 184 202 IPR022812 -
Aip02g00334 612 PRINTS Dynamin signature 203 219 IPR022812 -
Aip02g00334 612 PRINTS Dynamin signature 226 245 IPR022812 -
Aip02g00334 612 Pfam Dynamin central region 223 490 IPR000375 -
Aip02g00334 612 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 34 302 IPR030381 GO:0005525
Aip02g00334 612 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 310 IPR027417 -
Aip02g00334 612 SMART dynamin_3 1 253 IPR001401 GO:0003924|GO:0005525
Aip02g00334 612 Gene3D Dynamin, middle domain 334 588 - -
Aip02g00334 612 ProSiteProfiles GED domain profile. 520 612 IPR020850 -
Aip02g00334 612 SMART GED_2 515 608 IPR003130 GO:0003924|GO:0005525
Aip02g00334 612 Gene3D - 1 311 IPR027417 -
Aip02g00334 612 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 63 72 IPR019762 -
Aip02g00334 612 PANTHER DYNAMIN 2 611 IPR022812 -
Aip02g00334 612 PANTHER DYNAMIN-RELATED PROTEIN 1B 2 611 - -
Aip02g00334 612 CDD DLP_1 37 302 IPR001401 GO:0003924|GO:0005525
Aip02g00334 612 Pfam Dynamin GTPase effector domain 517 608 IPR003130 GO:0003924|GO:0005525
Aip02g00334 612 Coils Coil 467 487 - -
Aip02g00334 612 Pfam Dynamin family 40 215 IPR045063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00334 Aip-Chr2 4529235 4534137 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00334 - - gmx:100793097 1105.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00334 02 4529235 4534137 Aip02g00334 02 4529235 4534137 ECH