Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00332 ATGGCACCAAGGAACAGAAGTGGAAAGACCAAGGGAGAGAAGAAGAAGAAGGAAGAGAAGGTTCTTCCGGTTGTCATAGATATGACTGTGAACCTTGTTGATGAAACTCATGTTGTTCTCAAGGGAATATCAACGGACAGAATAATAGATGTTAGACGTCTCTTATCGGTGAACACAGAGACATGTTACATCACAAATTTTTCTCTATCACATGAGGTAAGGGGCCCTCGGTTGAAGGACACGGTGGACGTGTCCGCACTGAAACCTTGCATCCTCACTTTGGTTGAAGCTTCTACGAGTTCTTCTCTCTCTCACACCTCACTCCTCCCTTCCAATGTAATCTCTCTCTCTCTCTCTCTCTCTCTCTGCATTTTCTCTTTATTTTCACTTTCTGTTATGAAACTGTGTGCAGATATTAAGAGGGCGGCGAGGCGGCGCATGGAGGAGATATTGGAGGAGGATTATCTCTTCTCTCTTGATGTGAAGCTGTGTAATGGGAAAGTGGTGCACGTTGAAGCTTGCAGGAAGGGTTTTTACAGTGTTGGGAAGCAGCGGATTCTGTGTCACAATCTCGTCGATTTGTTGAGACAGCTCAGCAGAGCTTTTGATAATGCTTATGATGATCTCTTGAAGGCATTTTCAGAACGTAACAAGTTTGGCAATCTTCCCTATGGTTTCAGAGCAAACACATGGCTTGTTCCTCCTGTTTCAGCACAATCACCATCTATTTTCACTCCTCTTCCTGTGGAGGATGAAGCTTGGGGAGGAAATGGTGGTGGTCTAGGAAGGGATGGAAAGTTTGATTTGTTTCCGTGGTCCAATGAGTTTTCGTTTATTGCATCTATGCCTTGCAAGACCGCAGAAGAAAGGCAAGTTCGTGATAGAAAAGCATTCCTTCTGCACAGCTTATTTGTCGATGTTGCAATTTTCAGAGCAATAAAGGCCGTTAAAAATGTAATGGAAGATCCAAATTTTAGCGGCTCAGCTCGAGAAAACGATATTGTTTATTCCGAGAGAATAGGTGACTTGAGTATAAAAGTTGTGAAAGATGGTTCTTTTGCCAACTGTAAGATTGATACTAAAATCGATGGAGTAGATGCGACCGGAGTAAATGAAAAGGATTTAGTAGAGAGAAATCTACTGAAAGGAATCACTGCTGATGAGAACACTGCTGCGCATGACATCATCACTTTAGGTGTTATCAATGTAAGATATAGTGGTTATGTTGTTGTTGTGAAAGTTGATGGTGGAGTTAATGAAAACGTGAACCATCAGTCTCAACAAAATATTGACTTCATTGATCAACCAGACGGCGGTGCCAATGCACTCAACATTAACAGTTTGAGATTACTTCTCCATAATACAACACAATCAGAGAACAATAAACAAATGGCTCACGTGCAAACGCTTGAGCACGAAGAGGTTGGTGCTTCCCATGATTTTGTGGAGAAGCTGATAAAGGAAAGTCTTGCTAAGCTTGATAAAGAGGAAGTGAGTTTGGACAATTTTGTTAGATGGGAACTTGGAGCTTGCTGGATACAACATTTGCAGGACCAAAACAATGCAGAAAAAGATAAGAAACCTTCTTTAGAAAAGGCTAAACATGAGATGAAGGTTGAGGGTCTTGGAAAACCCCTTAAAGCCCTGAAGAACAACAAAAAGAAACCCGATTCAAACAATGCTAATTCAGCATCAGAGAATTCAAAACCCCTAGTTGAATGTGCTAATGGAGAGGTACAAGTTTCTCCATTTGTAGAATCTCAGCATGAAACTACAGCAGCTGAGAATGAGCGAGTGCTGAAGGAGATATTATCTGAAGCAGCCTTTATCCGATTAAAAGAATCAGGGACTGGACTGCACCGCAAGTCTATACAAGAGTTGATTGACTTATCAAAGAAATATTACACGGATGTTGCGCTTCCGAAACTGGTAGCAGATTTTGGCTCACTGGAACTCTCTCCAGTTGATGGTCGCACCCTAACTGATTTTATGCATACTAGGGGTCTTCGAATGCGTTCTCTTGGACAAGTTGTAAAGCTTTCTGAGAAATTATCACATGTGCAATCACTTTGCCTTCATGAAATGATAGTTCGTGCTTTCAAGCACATCCTGCAGGCAGTGATTTCTGCTGTTGATGACAAGGGGAAAATAGCAACATCAGTAGCTTGTGCATTGAATTTGCTTCTTGGTGTTCCTGAGAATAGAGAATTAGTTAATTCATCTGAAGTTCATCCTTTAGTTTGGAGATGGCTTGAGGTGTTTTTGAAGAAAAGGTTTAATTGGGATCTTAGCAGCTCGAATTACAAGGATGTGAGGAAGTTTGCAATTTTACGAGGTTTATGTCACAAGGTGGGGATTGAGCTTGTCCCAAAGGATTTTGATTTGGATTCTCCAACTCCCTTTCAGAAATCTGATATTGTCAGCTTGGTACCCGTTCATAAGCAAGCCGCATGCTCATCTGCAGATGGAAGGCAGCTCCTAGAATCATCCAAAACAGCTTTAGACAAGGGAAAGCTTGAGGATGCAGTTACCTTCGGCACAAAGGCTCTTGCCAAGCTTGTAGCAGTTTGCGGTCCTTACCATCGGATGACAGCAGGAGCATACAGCCTTCTTGCTGTAGTTTTATATCATACTGGAGACTTCAATCAGGCTACAATTTATCAACAAAAAGCTTTGGATATTAATGAGAGAGAATTAGGCCTGGATCATCCAGATACTATGAAGAGTTATGGGGATCTTGCAGTTTTCTATTATAGACTTCAACACACAGAGTTGGCTCTGAAGTATGTAAAGCGCGCTTTATATCTTTTGCACCTAACTTGTGGCCCATCTCATCCAAACACTGCTGCAACTTACATCAATGTCGCTATGATGGAAGAAGGTCTAGGAAATGTACACATTGCTCTTAGATATCTTCACAAAGCTTTGAAGTGCAACCAAAGATTACTTGGTCCAGATCATATTCAGACAGCTGCAAGTTATCATGCTATAGCAATAGCTCTCTCTTTAATGGAAGCATATCCATTGAGTGTGCAGCATGAGCAAACAACTTTGCAAATTTTGCGGGCAAAACTTGGCCCTGATGATTTGCGTACGCAGGATGCTGCCGCTTGGCTTGAGTATTTTGAATCCAAGGCATTTGAGCAGCAAGAAGCTGCTCGAAATGGTACACGGAAGCCTGATGCATCAATAGCTAGTAAAGGGCATCTAAGTGTGTCAGATCTACTTGACTACATTAATCCTAACCAAGATGCCAAAGGAAGAGATGTGGCAGCAAAGAGAAGAAGCCAGATACTAAAGGTGAGGGCCAAATCCTACCAGAGCACCGGATCTACGAGTTCTGATGAGTCTTCGAAGGAAACTCCAAAAGAGATTTCAGATGATGAGGTACATGAACCTGAACCTGAAGGTAGGGCAGATTCTGACCCGGGGAGCAACTCTGCATCTTATTCAGAACAGCCTATTTTAGAAAAGATCTCGGATGAAAAGCAGGATATTTCTGGTGAAGTTGTGTCTGAAGTGCATGGTGATGGGGAGGAAGGATGGCAACCAGTTCAAAGGCCAAGATCAGCTGGCTCATATGGTCGTCGTGTGAGGCAGAGACGTGCCACTCTTGGCAAAGTTTATAGTTATCAGAAGAAGAATGTGGAAGCTGGCACAGAATATCCTTTGGTAAGGAGTACTAATCAGAATAGCAGGGTTAAGTCTACGCCTGCGGCTTCCAAGACCTCCACAAATGTGACAGAAATTGTGGACAAGCCTTTGAGTTCTCATTCAGACTCTGGAACAAGTTCATCTGTGAATGATGCTAATCCGGGAAAGACTTCTCTAGTTAGCCTTGGAAAATCTCCTTCATACAAGGAAGTAGCCTTGGCTCCCCCGGGAACAATTTCCAAGTTCCAAGTCTATAATCCTCAAAGCGAGATTCCTGGTGGCGATGAACATGATCTCTGCAATGAACATGATCTTGGAAATCGTGATGCGGAGGACATTGAAGCCCATAGAAACACTGACTCAAACCTGGAAGAGGTGGATGATACACTTAAAGAGAAGCATGATGATTCACCAGCATATTGCGTAGATGGTTTACAAGATGATACTAAAGTTGCTGAGAAGAAAGAGGAAACCGAAATCATTGATTTTGTGCAAGATAATTGTGAGAATAATGAGGCTCTAGAATCTGGGGATGTAGAGGCTCAAGAAGCATCTGATAATAACATATTGGTTGGGGTAGTGGATGCTCCTGTAGACTCTCACAAACAAGAAACAGATGCAAGCAAATCATCAGGTGGTTTTGACTCGATCGATAATTCAACTCCTGTCTCCCAGGATAGTGAGAATATGAAGTTCAACACATCATCATCAAGTCCAACTCAGAGTCATGCTCAGGGCATTCCATATAAAAAATTATCTGCGTCTGCAGCTCCATTCAACCCATCACCTATCATGGCACGGGCTCCAACAATCGCAATGAATGCAACACTTCCTCCTAGTCCTGGTGCTGTTCCTACTATTGGCCCTTGGCCAGTGAACATGAATGTTCATCATGTTCCTCCAAGTCCTGCTACTGTGCTGCCTCCTCATCATGCATACCCTTCACCACCCCCAACACCAAACATGATGCAACCATTGCCATTTATGTATCCTCCGTATAGTCAACCTCAGTCAGTGCCAACCACCAACTTTCCAGTCACCACGGGTGCTTTTCATGCGAATCATTTTACTTGGCAGTGCAGTCTGAACCCTCCAAATGTATGTAAGTTTGGTCCTGGAGCCATTTGGCCTGTTTGTCAGCCTGTGGAATATCCTCTGCCAGCAGCTATCATTGAACCTCTCCAGGATCACATTTTGGAGCCACAGGTGCAGGGACATGTAACTGAAGTTTCAGGTGTAGTTCTGCCTGAGAGCATTGAAAACATTGGGGAATCCAATAAAGAAGTGAAAGGGTTGACTTCAGAGAGTAGTGAAAGTGAAGTGATTAGTGCTGTTTCGGAAGGTGTTAAAGAAAATGGTAATCCAAATTTTCCTCAAACTGAAAATGCTGGGAACAACCAAAGTCAAAGCATTGGAATAAATGATCATAGTAGCAGCAGTGAAATGAACATGGATGGTGAGAAGACATTCAGCATTTTACTTAGAGGACGAAGAAACCGGAAGCAGACTCTTAGAATGCCGATAAGTTTGCTTACTCGACCCCATGGCTCTCAGTCGTTCAAAGTTAATTATAACCGAATAGTTAGAGGAAGTGATGCTCCCAGTGTATCAGCTTTATATCGACACTATGCTTTGGAAGTTTTTGATGTCTCCTTTTTTAAGATGGAAGACTTGGAGGCTTTTCTTCAATTCAAAGCTTCATCATAA 5361 0.426 MAPRNRSGKTKGEKKKKEEKVLPVVIDMTVNLVDETHVVLKGISTDRIIDVRRLLSVNTETCYITNFSLSHEVRGPRLKDTVDVSALKPCILTLVEASTSSSLSHTSLLPSNVISLSLSLSLCIFSLFSLSVMKLCADIKRAARRRMEEILEEDYLFSLDVKLCNGKVVHVEACRKGFYSVGKQRILCHNLVDLLRQLSRAFDNAYDDLLKAFSERNKFGNLPYGFRANTWLVPPVSAQSPSIFTPLPVEDEAWGGNGGGLGRDGKFDLFPWSNEFSFIASMPCKTAEERQVRDRKAFLLHSLFVDVAIFRAIKAVKNVMEDPNFSGSARENDIVYSERIGDLSIKVVKDGSFANCKIDTKIDGVDATGVNEKDLVERNLLKGITADENTAAHDIITLGVINVRYSGYVVVVKVDGGVNENVNHQSQQNIDFIDQPDGGANALNINSLRLLLHNTTQSENNKQMAHVQTLEHEEVGASHDFVEKLIKESLAKLDKEEVSLDNFVRWELGACWIQHLQDQNNAEKDKKPSLEKAKHEMKVEGLGKPLKALKNNKKKPDSNNANSASENSKPLVECANGEVQVSPFVESQHETTAAENERVLKEILSEAAFIRLKESGTGLHRKSIQELIDLSKKYYTDVALPKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGQVVKLSEKLSHVQSLCLHEMIVRAFKHILQAVISAVDDKGKIATSVACALNLLLGVPENRELVNSSEVHPLVWRWLEVFLKKRFNWDLSSSNYKDVRKFAILRGLCHKVGIELVPKDFDLDSPTPFQKSDIVSLVPVHKQAACSSADGRQLLESSKTALDKGKLEDAVTFGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHIALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPNQDAKGRDVAAKRRSQILKVRAKSYQSTGSTSSDESSKETPKEISDDEVHEPEPEGRADSDPGSNSASYSEQPILEKISDEKQDISGEVVSEVHGDGEEGWQPVQRPRSAGSYGRRVRQRRATLGKVYSYQKKNVEAGTEYPLVRSTNQNSRVKSTPAASKTSTNVTEIVDKPLSSHSDSGTSSSVNDANPGKTSLVSLGKSPSYKEVALAPPGTISKFQVYNPQSEIPGGDEHDLCNEHDLGNRDAEDIEAHRNTDSNLEEVDDTLKEKHDDSPAYCVDGLQDDTKVAEKKEETEIIDFVQDNCENNEALESGDVEAQEASDNNILVGVVDAPVDSHKQETDASKSSGGFDSIDNSTPVSQDSENMKFNTSSSSPTQSHAQGIPYKKLSASAAPFNPSPIMARAPTIAMNATLPPSPGAVPTIGPWPVNMNVHHVPPSPATVLPPHHAYPSPPPTPNMMQPLPFMYPPYSQPQSVPTTNFPVTTGAFHANHFTWQCSLNPPNVCKFGPGAIWPVCQPVEYPLPAAIIEPLQDHILEPQVQGHVTEVSGVVLPESIENIGESNKEVKGLTSESSESEVISAVSEGVKENGNPNFPQTENAGNNQSQSIGINDHSSSSEMNMDGEKTFSILLRGRRNRKQTLRMPISLLTRPHGSQSFKVNYNRIVRGSDAPSVSALYRHYALEVFDVSFFKMEDLEAFLQFKASS 1786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00332 1786 MobiDBLite consensus disorder prediction 1427 1465 - -
Aip02g00332 1786 Gene3D Tetratricopeptide repeat domain 820 1116 IPR011990 GO:0005515
Aip02g00332 1786 MobiDBLite consensus disorder prediction 1222 1280 - -
Aip02g00332 1786 MobiDBLite consensus disorder prediction 1101 1200 - -
Aip02g00332 1786 Pfam Tetratricopeptide repeat 864 934 - -
Aip02g00332 1786 Pfam Tetratricopeptide repeat 948 1022 - -
Aip02g00332 1786 Coils Coil 513 533 - -
Aip02g00332 1786 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 1233 1749 IPR027523 GO:0006996
Aip02g00332 1786 SUPERFAMILY TPR-like 830 1018 IPR011990 GO:0005515
Aip02g00332 1786 MobiDBLite consensus disorder prediction 520 543 - -
Aip02g00332 1786 MobiDBLite consensus disorder prediction 555 570 - -
Aip02g00332 1786 MobiDBLite consensus disorder prediction 1302 1368 - -
Aip02g00332 1786 SUPERFAMILY Hypothetical protein c14orf129, hspc210 157 218 IPR023231 -
Aip02g00332 1786 CDD CLU-central 654 795 IPR033646 -
Aip02g00332 1786 SMART tpr_5 907 940 IPR019734 GO:0005515
Aip02g00332 1786 SMART tpr_5 865 898 IPR019734 GO:0005515
Aip02g00332 1786 SMART tpr_5 949 982 IPR019734 GO:0005515
Aip02g00332 1786 MobiDBLite consensus disorder prediction 1313 1368 - -
Aip02g00332 1786 MobiDBLite consensus disorder prediction 1117 1139 - -
Aip02g00332 1786 ProSiteProfiles Clueless (Clu) domain profile. 250 527 IPR025697 -
Aip02g00332 1786 MobiDBLite consensus disorder prediction 1666 1702 - -
Aip02g00332 1786 MobiDBLite consensus disorder prediction 1418 1465 - -
Aip02g00332 1786 MobiDBLite consensus disorder prediction 520 570 - -
Aip02g00332 1786 MobiDBLite consensus disorder prediction 1156 1182 - -
Aip02g00332 1786 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1233 1749 - -
Aip02g00332 1786 Pfam Translation initiation factor eIF3 subunit 135 652 794 IPR033646 -
Aip02g00332 1786 MobiDBLite consensus disorder prediction 1101 1116 - -
Aip02g00332 1786 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 1233 - -
Aip02g00332 1786 ProSiteProfiles TPR repeat profile. 865 898 IPR019734 GO:0005515
Aip02g00332 1786 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 1 1233 IPR027523 GO:0006996
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00332 Aip-Chr2 4498831 4509919 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00332 K03255 - gmx:100784117 2300.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00332 02 4498831 4509919 Aip02g00332 02 4498831 4509919 ECH