Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00311 ATGGCAAGAGTGAAGCATATTCCAACACCTAGTCAAAAAGGTAAGAAAAAAGTAAGACCATCACAATCTCCATCGCCATCGCAAGCGTCTGGTAGCAGAAGGAGGGAAGATGGAGAAGAGGAGCAGGAACCAGAAGCAGGACGACGATCAGCAGCACCTAAGAAAAGGCGTAATAAGCCAGGAACAGTAGCTCTTCGTGAGATTCGTAAATTTCAGAAGAGTTTCAACCTACTCATCCCAGCTGCCCCCTTCATGAGATGTGTCAAACAGATTACAAACCAACTATCTACGGAGGTCAATCGCTGGACAGCTGAAGCCATGGTAGCACTTCAAGAAGCAGCTGAGGATCATCTGGTTCGTTTGTTTGAAGATGGAATGTTGTGTGCTATCCATGCAAAGCGTGTTACTCTAATGAAAAAGGACATAGAGTTGGCCCGGAGACTCGGAGTGATAGGAAGACCTTGGTGA 468 0.4637 MARVKHIPTPSQKGKKKVRPSQSPSPSQASGSRRREDGEEEQEPEAGRRSAAPKKRRNKPGTVALREIRKFQKSFNLLIPAAPFMRCVKQITNQLSTEVNRWTAEAMVALQEAAEDHLVRLFEDGMLCAIHAKRVTLMKKDIELARRLGVIGRPW 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00311 155 PANTHER HISTONE H3-LIKE CENTROMERIC PROTEIN HTR12 15 155 - -
Aip02g00311 155 Pfam Core histone H2A/H2B/H3/H4 32 148 IPR007125 GO:0003677
Aip02g00311 155 MobiDBLite consensus disorder prediction 1 64 - -
Aip02g00311 155 MobiDBLite consensus disorder prediction 15 31 - -
Aip02g00311 155 PANTHER HISTONE H3 15 155 IPR000164 GO:0000786|GO:0003677|GO:0030527
Aip02g00311 155 MobiDBLite consensus disorder prediction 32 51 - -
Aip02g00311 155 Gene3D Histone, subunit A 2 150 IPR009072 GO:0046982
Aip02g00311 155 SUPERFAMILY Histone-fold 21 148 IPR009072 GO:0046982
Aip02g00311 155 SMART h35 50 153 IPR000164 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00311 Aip-Chr2 4151544 4155024 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00311 K11253 - gmx:100811872 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00311 02 4151544 4155024 Aip02g00311 02 4151544 4155024 ECH