Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00249 ATGAAGGATTCGAATTCGGATCTATTCGACCCGGTTATGGTTATGGAGTCAGAGTGGTCTCGCGGCGGCGACGCCGCATCGGAAGCTGATTTTGGGTTCGCCTTCAACGACAGCAACTTCTCCGACCGGATCCTCCGAATTGAGATCATGGACGATCCAGTGGACGCCCGAACAGATTCCGATGCCTGCGCCACCATCGCTGACTGGGCACGCCACCGTAAGCGCCGCCGCGAAGATATCAAAAAGGAGAATGCGGTGGATCTTGCTTTATTGCCAGAGGAACAAGTTTTGAACGGGAATCAACCTGATATGGATGATTTTGCGGCATGTGAAAATCAAGACGAAGAGGCTGTTGCAATGGTTGAGGAATCCCCTTCAGGTGATGAAGCTGGGACCAGTGTTGATTCAAACTGGAGCATGGATTGCACTTCAGTTGTGAGAGTTAAAACACTGCATATCAGTTCTCCTATTTTGGCTGCTAAAAGCCCCTTCTTCTATAAGCTTTTCTCAAATGGGATGAAGGAATCAGAGGAGAGGCATGTTACCTTAAGAATTAACGCATCTGAAGAAGCAGCTCTCATCCAGTTACTGAATTTTATGTACAGTAGCACTTTGACCAATACTTCAGCACCCGATGTGCTGGATGTGTTGATGGCTGCTGATAAATTTCAAGTTGCGTCATGCATGAGATATTGTAGCAGGTTATTGCGGAATATGCCCATGACACCTGACTCTGCATTGCTCTACCTAGAGCTTCCATCTAGTGTCTTAATGGCTGATGCAGTCCAACCATTGACTGATGCAGCAAAGCAGTTTCTTGCTGGTCGATACAAGGATATAAGCAAATATCAAGAAGAGGTTATGGCCTTGCCATTGGCTGGAATAGAAGCTATATTGTCTAGTGATGATCTCCAAGTTGCATCTGAAGATGCTGTATATGATTTTGTGTTGAAGTGGGCTCGAAATCAGTACAGCAAACTGGAAGAAAGGCGGGAGGTTCTGGGTGCACGGTTGGCACGTTTGATTCGCTTCCCTTACATGACCTGCCGAAAACTAAAGAAGGTCTTAACCTGTAATGACTTTGATCATGAGGTTGCATCCAAGCTTGTAGTTGAGGCACTATTTTTCAAGGCCGAGGCTCCACACCGGCAACGATCGCTGGCAGCAGAAGAGTCTGCCTCGTTGAACCGCCGTTTTGTTGAGCGGGCATACAAATATCGCCCAGTTAAGGTGGTAGAATTTGAACTTCCCCGTCAGCAGTGTATTGTGTACTTGGATTTGAAGCGGGAGGAATGTGCCAATTTGTTCCCATCCGGCCGGGTTTATTCTCAAGCGTTCCATTTGGGGGGACAAGGGTTTTTCTTGTCAGCACATTGCAACATGGATCAGCAGAGTTCTTTCCATTGCTTTGGGCTGTTCTTGGGAATGCAGGAAAAGGGTTCTGTTAGCTTCACTGTCGACTATGAATTTGCAGCGAGGTCTAGGCCCACAGAGGAATTTGTTAGCAAGTACAAAGGCAACTACACATTCACAGGAGGAAAGGCCGTCGGGTATAGAAACTTGTTTGCCATTCCGTGGACATCGTTCATGGCCGAGGATTGCCTTTATTTCATCAATGGTGTCCTACATCTTAGAGCGGAGCTCACTATCAGACATTGA 1659 0.4708 MKDSNSDLFDPVMVMESEWSRGGDAASEADFGFAFNDSNFSDRILRIEIMDDPVDARTDSDACATIADWARHRKRRREDIKKENAVDLALLPEEQVLNGNQPDMDDFAACENQDEEAVAMVEESPSGDEAGTSVDSNWSMDCTSVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEERHVTLRINASEEAALIQLLNFMYSSTLTNTSAPDVLDVLMAADKFQVASCMRYCSRLLRNMPMTPDSALLYLELPSSVLMADAVQPLTDAAKQFLAGRYKDISKYQEEVMALPLAGIEAILSSDDLQVASEDAVYDFVLKWARNQYSKLEERREVLGARLARLIRFPYMTCRKLKKVLTCNDFDHEVASKLVVEALFFKAEAPHRQRSLAAEESASLNRRFVERAYKYRPVKVVEFELPRQQCIVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFTVDYEFAARSRPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMAEDCLYFINGVLHLRAELTIRH 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00249 552 SMART BACK_2 255 357 IPR011705 -
Aip02g00249 552 ProSiteProfiles BTB domain profile. 140 209 IPR000210 GO:0005515
Aip02g00249 552 Pfam BTB/POZ domain 140 237 IPR000210 GO:0005515
Aip02g00249 552 Gene3D Potassium Channel Kv1.1; Chain A 108 272 IPR011333 -
Aip02g00249 552 Gene3D - 273 378 - -
Aip02g00249 552 SUPERFAMILY TRAF domain-like 439 550 - -
Aip02g00249 552 CDD BTB_POZ_ZBTB_KLHL-like 141 223 - -
Aip02g00249 552 SUPERFAMILY POZ domain 133 237 IPR011333 -
Aip02g00249 552 Coils Coil 317 337 - -
Aip02g00249 552 PANTHER OS02G0260700 PROTEIN 6 552 IPR045890 -
Aip02g00249 552 SMART BTB_4 140 240 IPR000210 GO:0005515
Aip02g00249 552 Pfam BTB And C-terminal Kelch 263 355 IPR011705 -
Aip02g00249 552 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN POB1 6 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00249 Aip-Chr2 3315216 3318463 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00249 - - gmx:100817612 979.548