Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00248 ATGGCCTCTGAAGCCGATTTTGGCTTCGCCTTCAACGACATTAACTTCTCCGACCGTATCCTCCGCATTGAGATCACCGACGACGAGCCTGTCGACGACCGTATCCGCCGCATCAAGATCACAGACGACGGACCTGTCGACGCCCCACCGGACTCCGATGCATGCGCCACCATCGCTGACTGGGTTCGCCACCGCAAGCGCCGCCGCTACGACATCAAGAAGGAAAACGATGTGGATCATGCTATGTTGCCAGAAGAACAAGTTTTGAACAAGTATCAACCTGATGCAGATGATTTTGTGGAATGTGAAAACGAAGACGATGATCTTGTTGTGGTGGTTGAAGAATCCCCTTCAGGTGATGAAGCCGTTGATGCAGATTGGAATTTTGTTCGCTCTGTGAAAACATTACATATCAGTTCCCCTATCTTGGCTGCTAAAAGTCCCTATTTCTACGAGCTTTTTTCAAATGAGACGAAGCAGTCAGAACAAAGACATGTCACCCTGAAAATTAATGCCTCTGAAGAAGGTGCTCTTATGCAGTTATTGAATTTTATGTATAGTAGTACATTGACCAATACTTCAGCGCCAGCTGTGCTGGATGTGTTGATGGTTGCTGATAAATTTAAAGTTGCATCATGCATGAGACACTGTAGCTCGTTGTTGCGGAATATGCCCATGACAACCGACTCTGCATTGCTATATATAGATCTTCCTTCTAGTGTCGAAATGGCTGAAACAGTCCAACCATTGTGTGATGCAGCAAAGCTGTTTCTTGTTAATAAATTCAAGGATATAGCCAAGTATCAAGAGGAGCTAATGACCTTGCCATTAGCTGGTATAGAAGCTGTAATTTCTAGTGATGATCTCCAGGTTGCATCTGAAGATGTTGTATATGACTTTATCTTGAAATGGGCTAGAAGTCACTACGGCAAACTGGAAGAAAGGCGACAAGTCCTGAGTAATCGGCTCTCACATTTTATCCGGTTCCCTCACATGAGCACCCGAAAACTTAAAAAAGTCTTAACGTGTAAGGACTTTGATTATGAGGTTGCATCCAATCTTGTACTTGAGGCCCTTTTTTACAAGGTTGAGGTTCCACACCGCCAACGGTCACTAGCAGCAGGAGATTCTTCCTCATTGTACCATCGTTTTGTTGAGCGGGCATTCAAGTATCGCCCAGTTAAGGTAGTAGAATTTGAATTTCCCCATAAGCAGTGTATTGTATACTTGGACTTGAAGCGGGAGGAATGTGCGAAGTTGTTCCCATCCGGCCGGGTGTATTCTCAGGCATTCCATTTAGGCGGACAAGGGTTTTTTCTGTCAGCACATTGCAACATGGATCAACAGAGTTCTTTCCATTGCTTTGGGCTGTTTCTTGGAATGCAGGAAAGGGGTTCAGTTGGCTTTACCGTCGAGTATGAATTTGCGGTGAGGTCTAAACCGATGGAGGATTTCGGAAGCAAATACAAAGGAAGCTATACATTCACAGGAGGAAAGGCTGTTGGCTATAGAAATTTGTTTGCCATTCCATGGACTTCGTTCATGGCTGAGGATTGTCGTTACTTCATTAATGGTGTCCTACACCTTAGAGCTGAGCTAACCATCAGAAACTGA 1614 0.4486 MASEADFGFAFNDINFSDRILRIEITDDEPVDDRIRRIKITDDGPVDAPPDSDACATIADWVRHRKRRRYDIKKENDVDHAMLPEEQVLNKYQPDADDFVECENEDDDLVVVVEESPSGDEAVDADWNFVRSVKTLHISSPILAAKSPYFYELFSNETKQSEQRHVTLKINASEEGALMQLLNFMYSSTLTNTSAPAVLDVLMVADKFKVASCMRHCSSLLRNMPMTTDSALLYIDLPSSVEMAETVQPLCDAAKLFLVNKFKDIAKYQEELMTLPLAGIEAVISSDDLQVASEDVVYDFILKWARSHYGKLEERRQVLSNRLSHFIRFPHMSTRKLKKVLTCKDFDYEVASNLVLEALFYKVEVPHRQRSLAAGDSSSLYHRFVERAFKYRPVKVVEFEFPHKQCIVYLDLKREECAKLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQERGSVGFTVEYEFAVRSKPMEDFGSKYKGSYTFTGGKAVGYRNLFAIPWTSFMAEDCRYFINGVLHLRAELTIRN 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00248 537 Pfam BTB And C-terminal Kelch 248 341 IPR011705 -
Aip02g00248 537 CDD BTB_POZ_ZBTB_KLHL-like 134 208 - -
Aip02g00248 537 ProSiteProfiles BTB domain profile. 107 194 IPR000210 GO:0005515
Aip02g00248 537 PANTHER OS02G0260700 PROTEIN 2 536 IPR045890 -
Aip02g00248 537 SUPERFAMILY TRAF domain-like 423 535 - -
Aip02g00248 537 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN POB1 2 536 - -
Aip02g00248 537 SUPERFAMILY POZ domain 129 222 IPR011333 -
Aip02g00248 537 SMART BTB_4 107 225 IPR000210 GO:0005515
Aip02g00248 537 Gene3D Potassium Channel Kv1.1; Chain A 103 248 IPR011333 -
Aip02g00248 537 Gene3D - 257 363 - -
Aip02g00248 537 SMART BACK_2 240 342 IPR011705 -
Aip02g00248 537 Pfam BTB/POZ domain 134 222 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00248 Aip-Chr2 3308747 3312080 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00248 - - cpap:110807101 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00248 02 3308747 3312080 Aip02g00248 02 3308747 3312080 ECH