Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00177 ATGAAGAAGTTGGTCCTCAAATTAGACTTGCATGATGACAAGGACAAACAAAAAGCTTTGAAAACAGTGTCAACACTTTCAGGTATTGATGCAATCTCAATGGACATGAAAGAGAAGAAATTAACAGTTATAGGGACAGTGGATCCAATAACTGTTGTAAGCAAATTGAGGAAGCATTGGCAAACAGATCTTGTGGTGGTTGGACCAGCCAAGGAGCCAGAGAAGAAAGATGATGGAAAGAAAGATGAAGGAAAAAAAGATGGAGAAAAAAAAGAAGAGGGAAAGAAAGATGGAGAAAAGAAAGAAGAAGAAAAGAAAGATGATAAGAAGAAAGATCAAGCACCACTTGACCCTGCTGCTGTTATGGAGATGGTTAAGGCTCAACAAAGGGCTTATTATTATTATAATAATCCCTACATGACAACACAATATCATACTCAAAGCATTGAAGAGAATCCCAATGCTTGTGTCATTTCTTAA 480 0.3688 MKKLVLKLDLHDDKDKQKALKTVSTLSGIDAISMDMKEKKLTVIGTVDPITVVSKLRKHWQTDLVVVGPAKEPEKKDDGKKDEGKKDGEKKEEGKKDGEKKEEEKKDDKKKDQAPLDPAAVMEMVKAQQRAYYYYNNPYMTTQYHTQSIEENPNACVIS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00177 159 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 158 - -
Aip02g00177 159 MobiDBLite consensus disorder prediction 63 120 - -
Aip02g00177 159 Pfam Heavy-metal-associated domain 9 58 IPR006121 GO:0046872
Aip02g00177 159 MobiDBLite consensus disorder prediction 69 116 - -
Aip02g00177 159 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 158 - -
Aip02g00177 159 Gene3D - 1 72 - -
Aip02g00177 159 SUPERFAMILY HMA, heavy metal-associated domain 2 58 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00177 Aip-Chr2 2681117 2684141 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00177 - - gmx:100819572 141.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02932 04 122010821 122014053 Aip02g00177 02 2681117 2684141 PCT