Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00175 ATGGTGTCGGTGAATCCGAACCCAGCTCAAGGATTTTTCTTCTTCGATCCTTCTTCGTCCAATATGGGACTTCCCGGCGTTAATCCGATGCCGCCTCCGCCTCCGCCGCAGCATGCTCCGGCAACCGTGCCATCAGCTGCTTTGATATCTCGTGTGATGACTTTGAACTCATTGAATGATAAAAGGAACACGTGGTTGATTGATCATGTAAAAATGATTATATTGTTAACACTATTTGATCGTGATTGGAAGAAGATTGAAGCATTTGTCGGCTCAAAAACTGTTATCCAGATACGGAGTCATGCACAAAAATATTTCCTTAAAGTCCAGAAGAATGGAACAAGTGAACATGTACCTCCCCCTCGGCCAAAGAGAAAAGCTTCTCATCCATACCCTCAAAAAGCTCCCAAGAGTGCTCCTACTGCATCCCATGTCACTGGGCCATTGCAATCTTCCTCAGCTTTCATTGAACCTGCATACATTTATAGCCCGGATTCATCATCTGTGCTAGGAACTCCAGTAACCAGTGTGCCTTTATCATCTTGGAATTATAACACCATGCCACCAAGCAATGTGGCCCCAAGCAATGTGCCACCAGCAACTAAAGGTCTTTATTTTACCTCAATGCCACCTTTTGACATTTCAATATTAAAATATGAGGGGCTTTTTGCTGAACTTTTTGTTTTGACAGATGATATGGGATTGGCTGGAGCTGGACAAGCTGTCCCTCTTACTTGTTGCTATAGCAGCAGTAATGAGAACACCCCTCCAACTTGGCCAAGTAACAATGGGTTTGAACAAAGAAACCAGACCAAGCCAATTAAAGTTATGCCAGATTTTGCACAAGTCTACAGCTTCATTGGCAGTGTATTTGATCCCAATTCTACTAATCATCTCCAGAGGCTGAAACAGATGGACCCAATAAATATGGAAACGGTACTGTTGTTGATGAGAAACCTCTCCATGAATCTAATGAGTCCTGAATTTGAGGATCATAAGAGGTTGCTTTCGTCATACGGAGCCAACTCTGAAGAGGCAAAGTTTGTCAATCCTTGCAGCAAGTTGCTCAAATCTGAGAGTGCTGTTCTAACTGCTTAA 1098 0.4326 MVSVNPNPAQGFFFFDPSSSNMGLPGVNPMPPPPPPQHAPATVPSAALISRVMTLNSLNDKRNTWLIDHVKMIILLTLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKASHPYPQKAPKSAPTASHVTGPLQSSSAFIEPAYIYSPDSSSVLGTPVTSVPLSSWNYNTMPPSNVAPSNVPPATKGLYFTSMPPFDISILKYEGLFAELFVLTDDMGLAGAGQAVPLTCCYSSSNENTPPTWPSNNGFEQRNQTKPIKVMPDFAQVYSFIGSVFDPNSTNHLQRLKQMDPINMETVLLLMRNLSMNLMSPEFEDHKRLLSSYGANSEEAKFVNPCSKLLKSESAVLTA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00175 365 PANTHER SWI/SNF COMPLEX-RELATED 230 360 - -
Aip02g00175 365 PANTHER MYB TRANSCRIPTION FACTOR 2 204 - -
Aip02g00175 365 PANTHER SWI/SNF COMPLEX-RELATED 2 204 - -
Aip02g00175 365 PANTHER MYB TRANSCRIPTION FACTOR 230 360 - -
Aip02g00175 365 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 76 108 IPR006447 GO:0003677
Aip02g00175 365 Gene3D - 68 111 - -
Aip02g00175 365 MobiDBLite consensus disorder prediction 110 146 - -
Aip02g00175 365 SUPERFAMILY Homeodomain-like 71 111 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00175 Aip-Chr2 2664374 2668105 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00175 - - adu:107472769 550.051