Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00066 ATGGACAACGAGCAAGTGATTGAGTTTTTGGGATGCGTTCCTCTTGTGCAGAGGCTTCCTCGCTCTTCAGTCAGGAAGATATCTCAACTCGTGGTTGTCAAACACTATGAGGCAGCAGAGTATGTTGCTCGCGAGGGTGAGGCTGGGGATGGTGTCTACTTCATCTGGGAGGGAGAGGCTGAGGTTGTTGGATCTGTGAAGGCCAATGATGAAATTCGTCCACAGTTTCAATTGAAAAGATATGACTACTTTGGTTATGGTTTTTCAAATCCAGTTCACCAGACAGATGTCATTGCTTTGTCAAAGCTCACTTGCTTGGTGCTGCCCCAAGAACACTTGCCACTGCTGCACCCTAATTCTATCTGGAGAGCCGACAACTCTGTCAAAACATCTTCAACTCTGGAGATTATATTGCATTTGGAACCCATTGAGGTAAATATTTTCAAAGGAGTTACACTTCCGGATGCTCCACATTTTGGAAAGGTGTTTGGGGGACAGTTTATTGGGCAGGCACTGGCTGCTGCATCAAAATCAGTTGACTTTTCTAAGCTTGTTCACAGCTTGCATGCCTATTTTATTCTTCCAGGGGACCTACACATGCCAATTGTATATAAAGTTGATCGTCTCCGAGATGGAAAGAGCTTTGCCACGCGGAGAGTTGATGCAATTCAAAAGGGAAATATTGTGTTCACTTTGCTGGCTTCATTTCAAAAAGAAGAATTAGGATTTGACCACCAGGAGGTAGCCATGCCATCTGTGCCTCCACCAGATAAGCTTTTGTCAATGGAGGAGCTGCGGGAGAGACGTCTTACTGATCCTCGTCTTCCAAAAACTTACCGGAACAAAATTGCTACAACTAAATTCACCCCCTGGCCAATAGAGATACGGTTCTGTGAACCTACAACTTCAACAAATCAGACCAAATCTCCTCCCAGTTTGAATTTTTGGTTTAGAGCAAAGGGAAAACTTTCAGATGATCAGGCCTTGCATAGGTGTGTGGTGGCATTTGCTTCTGATTTAATATTTCTTCAAGTAGCTTTGAATCCCCACCGGAAGCAGGGTATGAAGGCAAGCTCTGTTAGTCTTGATCATGCGATGTGGTTTCACCGACCTGTAATAGCTGATGACTGGATACTATATGTGATTTTTAGTCCTAGTGCCTATAATGCACGTGGCACTGTCACAGGCCAGATGTTCAATCAGAAACGAGAGCTTCTTGCATCATTGGTTCAAGAAGGCCTAATCAGAAAGGTTAAAAGCCAAAGTTCTGCAGCTAATTCTAAGTTATGA 1290 0.4403 MDNEQVIEFLGCVPLVQRLPRSSVRKISQLVVVKHYEAAEYVAREGEAGDGVYFIWEGEAEVVGSVKANDEIRPQFQLKRYDYFGYGFSNPVHQTDVIALSKLTCLVLPQEHLPLLHPNSIWRADNSVKTSSTLEIILHLEPIEVNIFKGVTLPDAPHFGKVFGGQFIGQALAAASKSVDFSKLVHSLHAYFILPGDLHMPIVYKVDRLRDGKSFATRRVDAIQKGNIVFTLLASFQKEELGFDHQEVAMPSVPPPDKLLSMEELRERRLTDPRLPKTYRNKIATTKFTPWPIEIRFCEPTTSTNQTKSPPSLNFWFRAKGKLSDDQALHRCVVAFASDLIFLQVALNPHRKQGMKASSVSLDHAMWFHRPVIADDWILYVIFSPSAYNARGTVTGQMFNQKRELLASLVQEGLIRKVKSQSSAANSKL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00066 429 SUPERFAMILY cAMP-binding domain-like 5 114 IPR018490 -
Aip02g00066 429 Gene3D - 128 419 IPR042171 -
Aip02g00066 429 Gene3D Jelly Rolls 2 126 IPR014710 -
Aip02g00066 429 PANTHER ACYL-COA THIOESTERASE 52 429 IPR003703 GO:0006637|GO:0047617
Aip02g00066 429 Pfam Cyclic nucleotide-binding domain 34 113 IPR000595 -
Aip02g00066 429 CDD CAP_ED 17 113 IPR000595 -
Aip02g00066 429 TIGRFAM tesB: acyl-CoA thioesterase II 138 416 IPR003703 GO:0006637|GO:0047617
Aip02g00066 429 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 248 417 IPR029069 -
Aip02g00066 429 ProSiteProfiles cAMP/cGMP binding motif profile. 15 85 IPR000595 -
Aip02g00066 429 PANTHER ACYL-COA THIOESTERASE 52 429 - -
Aip02g00066 429 CDD Thioesterase_II_repeat1 315 415 - -
Aip02g00066 429 Pfam Thioesterase-like superfamily 160 415 - -
Aip02g00066 429 CDD Thioesterase_II_repeat2 146 238 - -
Aip02g00066 429 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 131 240 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00066 Aip-Chr2 1304268 1307700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00066 1 429 Acyl Lipid Metabolism Gene Families AT1G01710 64.802 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00066 K01068 - gmx:100803260 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00066 02 1304268 1307700 Aip02g00066 02 1304268 1307700 ECH