Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00060 ATGCAAGAACAACTCTTTTCACTCGCACACTGCACCCTACCTGTGTCCAGATTCCCAAACAATGCAACTCCTCCAAATTTTGCAACTTTTCAACAATCCCATCACTCCTCCAAGCTCAGTTTCAATGTGGGTCTCAATCATTTGCTTCAAAAATCTAATTTTTTTCAAAGCGTACCTGGTTTGATGAGTAGCTATGATGGTTATGTGGGTGTAGTAGCAGAATGTGGTCCCTTTAATGGAGAAAGTGATGTTGCCGATTGTGATGATGGGTTTTACATAAGAAGGTGTGTTGAGCTTGCAAGAAAAGCTATTGGCTTCACAAGCCCCAATCCAATGGTGGGGTGTGTTATTGTGAAGGATGGGAAAATTGTTGGTCAAGGGTTCCACCCTAAAGCAGGTCAACCGCATGCTGAGGTGTTTGCCTTGAGAGATGCTGGCGATTTGGCGGAGAATGCCACGGCTTATGTGAGCTTAGAACCTTGTAATCATTTTGGAAGGACTCCACCTTGCACTGAAGCTTTAATCAAAGCCAAAGTGAAAAAAGTGGTGGTTGGGATGGTGGATCCAAATCCCCTTGTGGAATCCAAAGGGTTGGCTAGATTGAGAGATGCAGGTATTGAAGTTGTTGTCGGTGTAGAGGAAGAGTTATGCAAGAGCCTTAACGAGGCCTTTGTTCATCGCATGTTAACCGGAAAACCTCTCCTTACATTGAGATATTCTCTTTCTGTCAATGGGAATTTTTCAGACTTACTTGGAGATGGAGTTACAGAATGTGGTGGATACTATTCACGTTTATTGCAAGAATATGATGCAGTGATACTTTCCTCTTCCTTATTCAGTGGGAACATATCAATACCTGCATCTCAAGAACCTGGAGCAAATCAGCCGCTCCGGATTGTAATACATAAGGATTCTAGTTCTTCAAATGAAATTCCACTTGCTGTCAATGAAGTTACTGATAAAGTGATAGTTTTTACAGATAATGGAACAGCAAGCGCTCTAGAACTGGCCAAAAAAGGAATTGAAACCGTCATTTTGGATCATATAAATCTAGATGTGATTCTGGACTATTGTAATCGACAAGGGATGTGCAGTGTTCTGTTAGATTTGAGGGGAAATTCCAGTGAGTTTGAAGAGCTTGTTAAGGAGGGAATTCAGAAGAAAAACATTAGTAAATTTATGATAGAAATTTTGCCTATTTGGAATAAAAGTAGTGAGACAGATCCTCTAATACCGGTAAAAAGGTTAGATCAAGGAATCCAAGTGGAAAATTTAAAGTCCAAGTGTTCAGATCAAAATGTTATAATTGAAGGACATTTTAAATTTTAA 1329 0.4003 MQEQLFSLAHCTLPVSRFPNNATPPNFATFQQSHHSSKLSFNVGLNHLLQKSNFFQSVPGLMSSYDGYVGVVAECGPFNGESDVADCDDGFYIRRCVELARKAIGFTSPNPMVGCVIVKDGKIVGQGFHPKAGQPHAEVFALRDAGDLAENATAYVSLEPCNHFGRTPPCTEALIKAKVKKVVVGMVDPNPLVESKGLARLRDAGIEVVVGVEEELCKSLNEAFVHRMLTGKPLLTLRYSLSVNGNFSDLLGDGVTECGGYYSRLLQEYDAVILSSSLFSGNISIPASQEPGANQPLRIVIHKDSSSSNEIPLAVNEVTDKVIVFTDNGTASALELAKKGIETVILDHINLDVILDYCNRQGMCSVLLDLRGNSSEFEELVKEGIQKKNISKFMIEILPIWNKSSETDPLIPVKRLDQGIQVENLKSKCSDQNVIIEGHFKF 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00060 442 Gene3D Dihydrofolate Reductase, subunit A 227 440 IPR024072 -
Aip02g00060 442 PANTHER RIBOFLAVIN BIOSYNTHESIS PROTEIN PYRD, CHLOROPLASTIC 86 278 - -
Aip02g00060 442 SUPERFAMILY Dihydrofolate reductase-like 233 369 IPR024072 -
Aip02g00060 442 CDD Riboflavin_deaminase-reductase 93 205 - -
Aip02g00060 442 Gene3D Cytidine Deaminase, domain 2 83 226 - -
Aip02g00060 442 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 86 278 - -
Aip02g00060 442 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 136 174 IPR016192 GO:0008270|GO:0016787
Aip02g00060 442 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 87 209 IPR002125 -
Aip02g00060 442 TIGRFAM eubact_ribD: riboflavin biosynthesis protein RibD 94 395 IPR004794 GO:0008835|GO:0009231
Aip02g00060 442 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 92 186 IPR002125 -
Aip02g00060 442 SUPERFAMILY Cytidine deaminase-like 89 228 IPR016193 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00060 Aip-Chr2 1271815 1273854 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00060 K11752 - gmx:100786393 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00060 02 1271815 1273854 Aip02g00060 02 1271815 1273854 ECH