Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00046 ATGGCAGAACAACCAACCAAGGTGGAGACACCTCCTGCTCCGCTGGTAACTGACCCTCCTCTGGCCGAGGCACCGCCGCAGCTCCAAGATGCTGCTGAGAAGAAACCGCTGGCTCCGCCTCCGGCAGCCGCTGCAGAAGGGACCAAGGCTCTAGTTGTTGTTGAGAATGAGAAAGCAGTGGAGCCAATTAAAAAGAAAACATCCCTTGATAGAGATATTGCTCTTGCAGAAGTGGAAAAGGAGAAAAAGTTGTCTTATGTGAAGGCATGGGAAGAAAGTGAAAAATCTAAAGCAGAGAATAAAGCTCAGAAGCAGTTATCTGCTGTTGGTGCTTGGGAAAATAGCAAGAAAGCAGCTCTTGAAGCTAAGCTGAGAAAAATTGAGGAACAGTTGGAGAAAAAGAAAGCAGAATATGGCGAACAAATGAAGAACAAGATAGCATTGATTCACAAGCAAGCTGAGGAGAAGAGAGCAATGGTTGAAGCAAAGCGTGGTGAGGAATTTCTCAAGGCTGAGGAAACCGCCGCTAAATATCGTGCAACTGGGACCACTCCAAAGAAGCTCCTCGGATGCTTTTGA 579 0.4715 MAEQPTKVETPPAPLVTDPPLAEAPPQLQDAAEKKPLAPPPAAAAEGTKALVVVENEKAVEPIKKKTSLDRDIALAEVEKEKKLSYVKAWEESEKSKAENKAQKQLSAVGAWENSKKAALEAKLRKIEEQLEKKKAEYGEQMKNKIALIHKQAEEKRAMVEAKRGEEFLKAEETAAKYRATGTTPKKLLGCF 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00046 192 PANTHER OS02G0117200 PROTEIN 14 192 - -
Aip02g00046 192 MobiDBLite consensus disorder prediction 1 46 - -
Aip02g00046 192 PANTHER CARBOXY-TERMINAL REGION REMORIN 14 192 - -
Aip02g00046 192 Coils Coil 117 144 - -
Aip02g00046 192 Pfam Remorin, C-terminal region 82 187 IPR005516 -
Aip02g00046 192 Pfam Remorin, N-terminal region 29 78 IPR005518 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00046 Aip-Chr2 1163940 1166738 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00046 - - gmx:100802984 254.218