Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03411 ATGGACGTCGATAATGCCACTCCCAAGCGCACTAAGACAATGGGAGAAGTATGGAACGAGAACCCTGATTTTCAGTTTGATTTTTCTCAAGGTTTCTTTTCGCCGGTGGTGGAGGTGGAGGAAGTGCAAGGTGATCCGAGAGGGAAGAGGATATTGGATGGTCATGCTGCTGATACCAGTGGTGCTGCTGAAAGGTTGGTTCTTGGTGGTGACAACGGTGGTGGTGGTGGTAATTCCGGTGGTCTCAGGAGGTTAAGCAGGGAAGAGAAAATGAAAGGGCCGGTGGTGATGGAAATTGATTTCTTGGCAAATGCTTTTCATGACGAGGCATTCCGCGCACCTAGACCTGAAAATTCGAACCCTGGCGTTCCGATCGAAATTTCAGATGATGATAACGATGATGATGATGGCGGTGTTATAATCCTCCAGCCACCACAGGACAATCTTAGCTCCATGAGAAGGGAACGTTTCAGGGACATAGCCAAAGAAAATGCATCTCGGTTTGCCCGGTTCGTGCCGGATGCTAAGGATGCATCATCTAACCCTGAGCCTCCAGTGGAACCTCCAATTGATGAGGGGCCAACACCTTTCTCGACAGCTTTGAAATTTATCAGAGAGAAAGGGATGAAAAATGTGCAAAATAAATCATGGGTTCCTAAATCGAATCATACAAGACCTAGGAAGGTGCCATCATTGAAAGAAATATGCCTAAAAGTTCTTGCCAGCTATGCTGATGCAATTGTGTCACTTGATGGTGTCCCAGAAGACCTGAGGCACAGACTTAGCCAGCTGACATGTGACTCTCATCGGATGGACTCTCACTTTTTTGAACTTGTTGTTAAAGGGTCTCCCACTGAAATTCGCCTGAGAGATTGCTCATGGATGTCTGAGGATCAATTGACAGAATCTCTCAAAGTGTGTGACACTTCCAAATTGGAGGTGCTACAACTTGACCAATGTGGACGTTGCATACCTGATTATATTGTGACAAAGTCACCGAGGTGGTTACACTTACCTAGATTAATCAGTCTGTCCATCACTGGTGCTTGCCGTCTATCAGATAAGGGGTTGCGAGCGCTGGTTTCTTCTGCCCCGGCTCTTAGATCGGTGAACCTAAGCCAGTGCTCCCTTCTCACATCTGCCAGTGTTAATATTTTGGCTGATTCACTAGGACCACTTCTGAAAGAGTTGTATCTTGATCATTGCCAAAACATCGATACTGCATTAATTGTGCCAGCACTGAAGCAACTTGAAAATTTAGAAGTGCTGTCATTGGCAGGCGTGGGAACTGTTTGTGATAAATTTATCAAGGATTACATCATTGCCAATGGTCAAAACATGAAGGAGCTTATTTTAAAGGATTTCATTGCTGAACACTGTCCTCTGTTGTGTGTTCTTGATCTCGAGAACTTGCCTAATTTGACAGATTTATCTATAGGATATCTTGCCAATAATTGTCGAGCACTTAACACATTGAAGCTCCCCTGTACACCATTCAGCGATGAAGCAATAGCTGCCTTCATAGAGATCATTGGAGAGTCCTTGAAAGAACTTTCACTCAATAAAATCAAGAAGGTTGGTCAGCATACAGCCGTGTCACTTGCAAGCCATGCGAAAAATCTGCAAGTTCTAGATCTATCTTTTTGCCGAAATTTGACAGACACCGACTTGGGTTTGATTGTAGATAGCTGCTTCTCGCTAAAGTTTCTTATACTTTTTGGATGTACACAGGTTACAGATGTTTTTCTGAAAGGATATTCAAACCCAGAGACCCAGATCATTGGATTGCAGATGTCTCCTTTATTGCAACATGTCAAAGTGCCTGATTATCATCAAGGTGCTTTGCGTTATTCACCGGTACCTGTAAATTCGCCATAA 1878 0.4409 MDVDNATPKRTKTMGEVWNENPDFQFDFSQGFFSPVVEVEEVQGDPRGKRILDGHAADTSGAAERLVLGGDNGGGGGNSGGLRRLSREEKMKGPVVMEIDFLANAFHDEAFRAPRPENSNPGVPIEISDDDNDDDDGGVIILQPPQDNLSSMRRERFRDIAKENASRFARFVPDAKDASSNPEPPVEPPIDEGPTPFSTALKFIREKGMKNVQNKSWVPKSNHTRPRKVPSLKEICLKVLASYADAIVSLDGVPEDLRHRLSQLTCDSHRMDSHFFELVVKGSPTEIRLRDCSWMSEDQLTESLKVCDTSKLEVLQLDQCGRCIPDYIVTKSPRWLHLPRLISLSITGACRLSDKGLRALVSSAPALRSVNLSQCSLLTSASVNILADSLGPLLKELYLDHCQNIDTALIVPALKQLENLEVLSLAGVGTVCDKFIKDYIIANGQNMKELILKDFIAEHCPLLCVLDLENLPNLTDLSIGYLANNCRALNTLKLPCTPFSDEAIAAFIEIIGESLKELSLNKIKKVGQHTAVSLASHAKNLQVLDLSFCRNLTDTDLGLIVDSCFSLKFLILFGCTQVTDVFLKGYSNPETQIIGLQMSPLLQHVKVPDYHQGALRYSPVPVNSP 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03411 625 PANTHER UNCHARACTERIZED 146 618 - -
Aip01g03411 625 SUPERFAMILY RNI-like 308 581 - -
Aip01g03411 625 Gene3D Ribonuclease Inhibitor 532 599 IPR032675 -
Aip01g03411 625 Gene3D Ribonuclease Inhibitor 329 438 IPR032675 -
Aip01g03411 625 MobiDBLite consensus disorder prediction 67 87 - -
Aip01g03411 625 MobiDBLite consensus disorder prediction 174 195 - -
Aip01g03411 625 Gene3D Ribonuclease Inhibitor 439 531 IPR032675 -
Aip01g03411 625 MobiDBLite consensus disorder prediction 112 131 - -
Aip01g03411 625 PANTHER F-BOX/LRR PROTEIN 146 618 - -
Aip01g03411 625 SMART LRR_CC_2 364 389 IPR006553 -
Aip01g03411 625 SMART LRR_CC_2 460 485 IPR006553 -
Aip01g03411 625 SMART LRR_CC_2 486 510 IPR006553 -
Aip01g03411 625 SMART LRR_CC_2 538 563 IPR006553 -
Aip01g03411 625 SMART LRR_CC_2 512 537 IPR006553 -
Aip01g03411 625 SMART LRR_CC_2 338 363 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03411 Aip-Chr1 137066287 137069933 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03411 K15082 - gmx:100808150 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03411 01 137066287 137069933 Aip01g03411 01 137066287 137069933 ECH
Aip01g03411 01 137066287 137069933 Aip03g02609 03 47889826 47893785 PCT