Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03396 ATGCTGCATACAAGGCAGAGATCCACCACCACCACCACCATGGTTCAAGTAGCTGCCTCATCCTTCCCACAAAGGAGGAGAACTCCTTCATTCTCTTCCTCTCTTCTCGACGCCATTTACCATTCTATCGACGAATCAAAATCCCACCTTGATCAACATCAACAACTGGGTATCACTATGGCTACTCCCTACACTACCGCCACCACCACCAAACACAACCACCATGGCGGGGTAGAGAGAAGAACCATTAAAGAGCGCATGGACCTACGCCGTGCCGTCATGTTAGAGGATTGGATCGACAAGCACACTTCTTCTTCTTCCTCCTCTTCTTCCTCCTCGGAAACTGACACATCCACATACAACAAACAGCATAAGAGACGAGAAGGTGGCGGCGGCGGCGGCGGTAGTTTCGCGAGGACAAAGTTAAGGGCCATGAAGATCTACGGCGAGTTGAACCAGAGAGTGAAGCAACCAATTTCACCGGGTACGGGTAGCAGAATCGCTAGCTTCCTGAGCTCAATCTTCAGCTCGGAGAATGTTAAGAAGGCAAAGATGTGTTACGTTGGTGCAGTAGAAGATGTTAGCTTCGACCACCACAGTAGTAGTAGTAGTAAATCAAAGTCACCACCGTGTTTCTCTTCCTCTTCTGCTTCTTCATTTTCAACAAGGTCTTGCATGATGAGCAACAAGACTCCTCCTCCTCCTCCATCTTCGAAAGGAAAAACCAGTAACAACAACAACAAGAATGGCGGTGTGAAAAGGTCTGTGAGATTCTACCCTGTTAGTGTCATCCTTGGTGAAGATTCTCAACCATGCGGCCACAAGTGTATTTACGAGAATGACCCTAAAAAGAACAATAACAGTACAGAGAATGATGATGATGATGATGATGATGATGGTATGAGTTGTTCAAGTTCAGATTTGTTTGAGTTGGATCACCTTATTGGATCATCAGCTGCAGGAATTAGATTCAATGAAGAGCTTCCTGTTTATGAAACCACCAATTTAGAAACAAATAAAGCAATTGCTAATGCTTTGCGTTTTTAG 1047 0.4546 MLHTRQRSTTTTTMVQVAASSFPQRRRTPSFSSSLLDAIYHSIDESKSHLDQHQQLGITMATPYTTATTTKHNHHGGVERRTIKERMDLRRAVMLEDWIDKHTSSSSSSSSSSETDTSTYNKQHKRREGGGGGGGSFARTKLRAMKIYGELNQRVKQPISPGTGSRIASFLSSIFSSENVKKAKMCYVGAVEDVSFDHHSSSSSKSKSPPCFSSSSASSFSTRSCMMSNKTPPPPPSSKGKTSNNNNKNGGVKRSVRFYPVSVILGEDSQPCGHKCIYENDPKKNNNSTENDDDDDDDDGMSCSSSDLFELDHLIGSSAAGIRFNEELPVYETTNLETNKAIANALRF 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03396 348 MobiDBLite consensus disorder prediction 100 138 - -
Aip01g03396 348 PANTHER PROTEIN BIG GRAIN 1-LIKE A 18 284 - -
Aip01g03396 348 PANTHER PROTEIN BIG GRAIN 1-LIKE A 290 346 - -
Aip01g03396 348 MobiDBLite consensus disorder prediction 277 303 - -
Aip01g03396 348 MobiDBLite consensus disorder prediction 218 253 - -
Aip01g03396 348 MobiDBLite consensus disorder prediction 100 118 - -
Aip01g03396 348 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 290 346 IPR039621 GO:0009734
Aip01g03396 348 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 18 284 IPR039621 GO:0009734
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03396 Aip-Chr1 136970725 136972036 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03396 - - adu:107458555 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03396 01 136970725 136972036 Aip09g01148 09 17046554 17048154 ECH
Aip01g03396 01 136970725 136972036 Aip10g02569 10 113208453 113209678 ECH
Aip01g03396 01 136970725 136972036 Aip01g03396 01 136970725 136972036 ECH