Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03391 ATGTCATGTAATGTTGATGTTTCAGAGTTCAATGGCACAATCAATAGTGACAACAATAAATGTCTGTACAAGGAAAACCGAGCTTCATTTTTGAATTTCAGAACGGGGGTGGCGAAGGCTTGGATTGCGCAACATATTGTTTTCTTCTCCCTTGCCTTCCAATGTTGGTATTCCTTCCAATGCCACCCGCATAGGTTGAAGATGGAAGAAAACAAGAGCAAACAAGGTTCTGAAGAGCAAAATGGAGAAAAGAGTAATCAAGGTTCTGAAGAGCAAAAAAGGTTTTTGAGAGGTGTTGAATCTATAAGCAGGGCCCTGAGCCTGGACGGAAGCTCATCAAAGGATTCATCCTCCACCCCGAGAACTCGATCCAAATCCATCAGGAAAGCACCGCCGTTACCTGATCCTAAATCAAGTCCTGAGGCTGGTAAAAATGATAATCTGCGCAAGGAGAAGAAGTCCATATGGGATTCATTGAAGGCCCTTTCCCTCTCCCGAAACCGCAAGTTCGAATGCCGGTTTTCCCTCCAAGTCCATTTGATTGAAGGATTGCCTTCTAGTTTCAACGATGCTAGCATTTGTGTGTATTGGAAGAGGAAGCGTGATGTTATGGTGACACACCCTGCCAAGGTGATTCTAGGTGCTGCTGAGTTTGAACAAATGTTGACATACACTTGCACAATCTCTGGAAGTAAGAGTCGACCTCAAAATTCTGCAAAATATGAACCAAAGCATTCTTCACTCTATGCTTCCATGGTTGGTGCTGCAGAACTTGATTTGGGGAAGCACCGGGTCGATCTCACAAGGTTCCTTCCTCTCACACTCGAAGAGCTTTCGGAGGAGAAGAGCTCGGGGAAGTGGAGCACAAGTTTTAGATTATCAGGAGCAGCTAAAGGTGCAGTGATGAATGTCAGTTTTGGTTATGTAGTGGTTGGTTCCCGTGGTACCATAGACAATCAGGATTCTCCTAATGAATTGGGGTTGGGGCAGAACGATTCGCCTTCTGCGATGCAACTGGATAAAGCACACGGTCTGACTAAAACAGACCTGTTGCGTACCGGAAGTTTGCCAATCTTTTCCCCGGATTATTCATCCCAAAATGCAGAAGAGGTAATGGATCTTCATGAGGTAATACCATTGCCAAAATCAGCTAGCTCAGGAGACATCTTCCATCAGAGTCCTGATATAGAAGAGATATGTTCTCCGTACAGACCTAAAGATTATGAAGAAAACATTAACAAACCAGATTCATCCGATATTGAAAACGAGAATCCCAAAAATCATCAAGATATCGAAGAAAAAACATCTCCTCATGCATGTAGCAAACCAGAATATCTTGTGTTTCAAGTTAATGTAGAGACGGTTAAACCAGAGGATTTTCCATCAACTAATTCCAGAAATGAAAAGCATGAAGGGTGTGAATCTAATGGATATTCTGTTGTTGATAAGGCCATTGAATTTTTTTCATCATATGAACGTGTTAATCTAGAGCAATCGTCCATGAAGGCTGTTGTTAAAAAGCATACATTTAACAGTACCAATACCCTTGATAGTGTTGCTGAACAAGTATCTTCTCAAGATACTGTTAAACATGATACGCAGGAAAAGGCTCTAGTATGTGAATTTTATCACCAAGATGACTTGTGCACCCAAAAACTTCCCTTGCAAGAAGCAGATTCAGCTTTGGACAGTGTTAAAGATTTGGAGGTAGTTGCACAAGTGTCTGGACAAGAAGAAAATCCTGAAGAATGGGAAGGAGATGGATTTTCTGCTGTTGATAAGGGCATTGAATGCTCATCAGATGAACATGTAAAATTAGAGGTATGCACTGCAAAGGCTCTTGTCCATGATCATAAATTTGACAGTACCAGCATCCTTGAAACTGCTGTTAAACATGATTCCGAGGATGAGGTCAACGATGGTGCTGAGGAAAAGGCTATAGTACATGAGTTTTCTCACAAAGAACTACTCTTGCAAGAAATAGGGTCAGCATTGATCAGTGTCAAAGATTCTCCTATGATCATGGAAGCCAAAACTGAATACAAGAAAAGAAACACATATAGCTTGGATGATGTCACGGGTTCATTTTTAAGCATGCTTGGCATAGACGATAGTCCAATGAAGTTGAGTCCTAAAAGTGGGCTCGAATCTCCAAGAGAGCGCCTTGTAACACAATTTGAGATGGACAGTAGGTCTGAGGGCTTCTCATCGTTTGATGTTGATAAGGGAAGTAATAATGAAATAGATGATGCTCACGAAACTTCTATTGGATCAGAGCCCTTGAACTTCGCTAATTGTATCAAGTCATCATCCTTTTCAGAAGATCTGCATGCAGGGCATCTAGTTCAGCTCCAGCATATGAGCGAAGAAAAGGCACAGGCGTTAGAAGAGATGGAAACAGAAGCCTTAACGTGTGAGTTGGGTTTGAATGAGAAGGCTTTTCAACATTCTCCACCAAAAAACTATGCTAGCTATGAAAGTCCGATTCATGCACTACCTGAAGAGCCTTTACGCTTACCTCCTTTGGCAGAGGGTTTAGGCCATTGTCTTCAGACAAGCAACGGAGGGTTTCTACGATCTATGAGTCCTTCACTTTTCAAGAATAGTAGAAGTAGTGGGAGACTAGTCATGCAGATTTCTCACCCTGTTGTGGTACCTGCGGAAATGGGTTCTGGGATGATGGAGATTGTACAATGTTTGGCTTTGATGGGAATTGAAAAGCTTTCGATGCTGGCAAAGAAGTTAATGCCTCTGGAAGATATTACAGGGAAGACAATACAACAAATAGCATGGGAAGCTATGACAATAAAGGGAAAAGAGAGACAATGCCATTTGCAACATAACTTGGTAACACAAGAAGATACAACTTGTGTGCTAAGAGGATTGAAGGGAACATCATCTGGTTCAGTTGGCAACCAGACAGGCTCAGAGTTTGTTGCATTTGAAGCTCTAGCTCCATTGGCTATGGATAAAATAGAAGCACTTGCAATGGAGGGTTTGAGAATACAATCTGGGATGGAGGAGACGGATGCACCATCAAACATCACCGCGCAATCCTTTGGGGATATTTCAGCTCTGCATGCTAAGGGAAATAACAGTAACGAGTCCGATGAAGCTGTTGCTTTGGGGTTGATAGAAACAAAAGATAGCAGTGTTGTTGATGGGATAATGAGCTTATCATTGAGTCTTGATGAATGGATGAGGTTAGATTCTGGCGAGATTGATGATATAGATAATATCAATGAGCATACATCCAAAATTCTAGCTGCCCATCATGTTAACTCCCTTGATTTAATTCATCGGATTTCAAATATCAAGAGGAAACGAGGAAAAGAACCTGAAAGGAAACATGGTTTGCTGGGAAACAATTTCACAGTAGCATTAATGGTGCAACTTCGTGATCCTCTGAGATCTTTTGAGTCTGTTGGAACACCAATGCTTGCTCTTATACAAGTCAAGAGGGAGTTCTTCCCACCAAAGCCCAGGAATCTATCTGAGGTAGGTAACACCGATGAGGAAGAGGATGATGATTGTAAAACAATAGGCAAGGTTGAGACAGAGAAACCTTCAGAAGGGGAGGGAATTCCTCAGTTCAGAATCACAGAAGTGCATGTTGCAGGCTTGAAAACTGAGCCTGCCTACAAGAAGAAGGATTGGAGGTCTTGGGGCACATCAAGACACCAAAAATCTGGTTCCCGCTGGTTGCTTGCTAACGGAATGGGAAAGTGCGAAAAGAATCCATTCCTCAAGTCAAAGCCTGTTTCCACATGTAATGCTCCACTCACCCCTAAGGTGCAACCTAATGACATATTGTGGAGTATATCATACCGTATGTATGGTACTGGAGACAAACGGGTGGATCTGACAGCATTAAACTCACCTATCAGGAATCCCAATATCTTTATACGGAATGAAACTAGAAGACCACGTTGA 3933 0.4221 MSCNVDVSEFNGTINSDNNKCLYKENRASFLNFRTGVAKAWIAQHIVFFSLAFQCWYSFQCHPHRLKMEENKSKQGSEEQNGEKSNQGSEEQKRFLRGVESISRALSLDGSSSKDSSSTPRTRSKSIRKAPPLPDPKSSPEAGKNDNLRKEKKSIWDSLKALSLSRNRKFECRFSLQVHLIEGLPSSFNDASICVYWKRKRDVMVTHPAKVILGAAEFEQMLTYTCTISGSKSRPQNSAKYEPKHSSLYASMVGAAELDLGKHRVDLTRFLPLTLEELSEEKSSGKWSTSFRLSGAAKGAVMNVSFGYVVVGSRGTIDNQDSPNELGLGQNDSPSAMQLDKAHGLTKTDLLRTGSLPIFSPDYSSQNAEEVMDLHEVIPLPKSASSGDIFHQSPDIEEICSPYRPKDYEENINKPDSSDIENENPKNHQDIEEKTSPHACSKPEYLVFQVNVETVKPEDFPSTNSRNEKHEGCESNGYSVVDKAIEFFSSYERVNLEQSSMKAVVKKHTFNSTNTLDSVAEQVSSQDTVKHDTQEKALVCEFYHQDDLCTQKLPLQEADSALDSVKDLEVVAQVSGQEENPEEWEGDGFSAVDKGIECSSDEHVKLEVCTAKALVHDHKFDSTSILETAVKHDSEDEVNDGAEEKAIVHEFSHKELLLQEIGSALISVKDSPMIMEAKTEYKKRNTYSLDDVTGSFLSMLGIDDSPMKLSPKSGLESPRERLVTQFEMDSRSEGFSSFDVDKGSNNEIDDAHETSIGSEPLNFANCIKSSSFSEDLHAGHLVQLQHMSEEKAQALEEMETEALTCELGLNEKAFQHSPPKNYASYESPIHALPEEPLRLPPLAEGLGHCLQTSNGGFLRSMSPSLFKNSRSSGRLVMQISHPVVVPAEMGSGMMEIVQCLALMGIEKLSMLAKKLMPLEDITGKTIQQIAWEAMTIKGKERQCHLQHNLVTQEDTTCVLRGLKGTSSGSVGNQTGSEFVAFEALAPLAMDKIEALAMEGLRIQSGMEETDAPSNITAQSFGDISALHAKGNNSNESDEAVALGLIETKDSSVVDGIMSLSLSLDEWMRLDSGEIDDIDNINEHTSKILAAHHVNSLDLIHRISNIKRKRGKEPERKHGLLGNNFTVALMVQLRDPLRSFESVGTPMLALIQVKREFFPPKPRNLSEVGNTDEEEDDDCKTIGKVETEKPSEGEGIPQFRITEVHVAGLKTEPAYKKKDWRSWGTSRHQKSGSRWLLANGMGKCEKNPFLKSKPVSTCNAPLTPKVQPNDILWSISYRMYGTGDKRVDLTALNSPIRNPNIFIRNETRRPR 1310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03391 1310 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 81 575 IPR039614 -
Aip01g03391 1310 Coils Coil 781 801 - -
Aip01g03391 1310 ProSiteProfiles C2 NT-type domain profile. 162 310 IPR019448 -
Aip01g03391 1310 MobiDBLite consensus disorder prediction 107 125 - -
Aip01g03391 1310 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 81 575 - -
Aip01g03391 1310 MobiDBLite consensus disorder prediction 70 93 - -
Aip01g03391 1310 MobiDBLite consensus disorder prediction 408 438 - -
Aip01g03391 1310 MobiDBLite consensus disorder prediction 107 149 - -
Aip01g03391 1310 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 576 1308 IPR039614 -
Aip01g03391 1310 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 576 1308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03391 Aip-Chr1 136927365 136932590 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03391 - - ahf:112722166 2425.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03391 01 136927365 136932590 Aip01g03391 01 136927365 136932590 ECH
Aip01g03391 01 136927365 136932590 Aip03g02568 03 45665223 45669273 PCT