Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03362 ATGGCTGAGAAGACTTTTCAGTTTCCAACATACTTCAAACTACTTCTAATAATCATAACCACTTTGGGAAAAATTGTGACGGCGGAAGAGATTTCCGCCGTGGAAAACATTTCCGATAAGCTCCGTAACGACACCGAAAGTCTCTGGAAGGTTTCCAGAGACTTTGGCAACATAGTCCACGAAGTGCCGGCAATGGTGTTCCATCCGGCTTCCGTGGACGACATAGCGAACTTGATTAAATCGTCGTACAGTAGCCCTGTTCCGTTCGCGATAGCCGCGAGAGGACAGGGCCACTCTACGGGTGGGCAGGCCATGGCTCGCGACGGCGTAGTCGTGGACATGGCCGCCCTGAGGAGGGAGAGAAAGAAGAAGGGAGTTGGAGGGATAAGTATTGATGTGTATGGGGAATATGTTGATGTTGGTGGAGAACAACTTTGGATCGATGTGTTGAATGAGACCGTTGAAAATGGAGTTGCACCGATTTCTTGGACGGATTATTTGTATTTGAGTGTGGGAGGGACACTCTCCAACGCTGGGATTAGTGGCCAATCATTCAGATATGGACCTCAAATCTCCAATGTTCTTGAGATGGATGTTGTTACTGGAAAGGGAGATTTAATAACATGCTCTAAGCAAAAGAATTCAGAGTTATTTCACGCGGTTCTTGGAGGCTTAGGACAGTTTGGAGTTATAACAAGAGCAAGAATTTCTCTTCACCCAGCACCCACAAAGGTTAAGTGGATAAGATTGCTCTATAGTGACTTCTCTGCTTTCACAAGAGACCAGGAACGATTAATCTCAATCAAAGCGTTGGATTATTTGGAAGGGAATTTGCTAATGCACCAAGGTCCCATAAATAATTGGAGATCCTCTTTCTTCCCTCTCTCCGATCATCTCAGAATTGCTACCTTAATAACCAAACACAAAATTCTCTATTGCCTTGAACTCTCTAAATATTATTATCATCACCAATCCCAAGAAAATGTGAACAAGGAAATTGAAGAACTGCTAGAAGGAATGGGGAACATCCCTGGGTTTTATTATGAGAAACATGTGTCATATGTTGAGTTCTTGAATAGAGTCCGAAGTGGAGAGTTGTGGCTTCAGTCACAAGGGTTGTGGGAAGTTCCTCATCCGTGGCTTAATTTGTTCATACCAAAATCTCAAATCATGCAATTTAATTCAGGCGTTTTCAGGGGCATCATTTTCAAAAGAAACATTACCACTGGACCTGTCTTGGTTTATCCCATGAACAGAAGCAAGTGGGATGATAAGATGTCAGCATCAATTCCAGATGAAGATGTGTTCTACACGGTGGGATTTTTGCACTCAACTGGGTTTGATAAATGGAATGAATTTGATGCTGAAAACAAAGAAATCTTGAAGTTTTGTAGTGATAATGGCATCAAGGTGAAGCAATATCTTGCCCAACACAGCACACAAGAAGAATGGAAAAACCATTTTGGGGATAATAAATGGAAGGATCATAGGAGCAACCCTACAGCAATAATTGAGATCCTAGATTGGCTGATATCAATCTCTATTAGAGACTGGATGGGTGATGAAAGTGCAGGTAATGGTGCTATTGCTTCTGGAGCAATATCAACATCAGCAAGGGCAGTACTTACTTCTAGATCAACCCCATGTGCAGCAGGGACAACAACTACGTACTAG 1674 0.4283 MAEKTFQFPTYFKLLLIIITTLGKIVTAEEISAVENISDKLRNDTESLWKVSRDFGNIVHEVPAMVFHPASVDDIANLIKSSYSSPVPFAIAARGQGHSTGGQAMARDGVVVDMAALRRERKKKGVGGISIDVYGEYVDVGGEQLWIDVLNETVENGVAPISWTDYLYLSVGGTLSNAGISGQSFRYGPQISNVLEMDVVTGKGDLITCSKQKNSELFHAVLGGLGQFGVITRARISLHPAPTKVKWIRLLYSDFSAFTRDQERLISIKALDYLEGNLLMHQGPINNWRSSFFPLSDHLRIATLITKHKILYCLELSKYYYHHQSQENVNKEIEELLEGMGNIPGFYYEKHVSYVEFLNRVRSGELWLQSQGLWEVPHPWLNLFIPKSQIMQFNSGVFRGIIFKRNITTGPVLVYPMNRSKWDDKMSASIPDEDVFYTVGFLHSTGFDKWNEFDAENKEILKFCSDNGIKVKQYLAQHSTQEEWKNHFGDNKWKDHRSNPTAIIEILDWLISISIRDWMGDESAGNGAIASGAISTSARAVLTSRSTPCAAGTTTTY 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03362 557 Gene3D - 244 474 IPR016170 -
Aip01g03362 557 PANTHER CYTOKININ DEHYDROGENASE 3 30 497 - -
Aip01g03362 557 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 242 495 IPR015345 GO:0009690|GO:0019139|GO:0050660
Aip01g03362 557 Pfam FAD binding domain 63 210 IPR006094 GO:0050660
Aip01g03362 557 Gene3D - 45 496 IPR016167 -
Aip01g03362 557 SUPERFAMILY FAD-linked oxidases, C-terminal domain 242 496 IPR016164 GO:0003824|GO:0050660
Aip01g03362 557 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 63 98 IPR006093 GO:0016491
Aip01g03362 557 SUPERFAMILY FAD-binding/transporter-associated domain-like 39 241 IPR036318 GO:0050660
Aip01g03362 557 PANTHER GULONOLACTONE OXIDASE 30 497 - -
Aip01g03362 557 Gene3D - 114 243 IPR016169 -
Aip01g03362 557 ProSiteProfiles PCMH-type FAD-binding domain profile. 59 241 IPR016166 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03362 Aip-Chr1 136720176 136730273 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03362 K00279 - gmx:100787676 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03362 01 136720176 136730273 Aip01g03362 01 136720176 136730273 ECH
Aip01g03362 01 136720176 136730273 Aip03g02455 03 41028002 41032310 PCT