Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03351 ATGGTGGTGAAGAAACCACGGANNNNNNNNNNNNNNNNNNNNNNTGCCAACAAGCTCCACAGTGTGACAGCCTCAAAGGACTTGTTTGAGGTTTGTGTTGTGGAAGGTGGAAGCAGGATTGGAGGGAGAATCAACACCTCTGAGTTCTGTGGTGACCAGATTGAGCTTGGTGCTACTTGGATCCATGGAATTGGAGGAAGCCCTCTTCACAAGATTGCTCAACAAACACACTCATTGCTTTCTGACAAGCCTTGGGAGTGCATGGATGGAAACTCATCAGATCAAACCACCATCACCATTGCTGAAGGTGGCTTCCACTTGGACCCTTCCATTGTAAACCCCATCACAAGGCTCTTCAAGAACCTCATGGATCATGCTCAGGGCAAGAACCAGAAGAACAACATCACTGAACGAGATACTACTGCAAGAGGTGATGAATTTCTTCACAGCTTCTGTAAGAAGGTGTCAACAAGAGTTGGCTCTGCAGGCCTTAGTATTGGTTCTTTCCTCAGGGGAGGCCTTGATGCATACTGGGATTCATCAAAGGATCAAGAGGAGTTCAAAGGGTGTGGGATATGGAACAGGAAGTTACTTGAAGAAGCAATCTTCGCAATGCATGAGAACACACAGAGGACATACACATCTGCTGGTGATCTCTTGAACCTTGATTACAATGCTGAGAGTGAATACCAAATGTTCCCTGGTGAAGAAATCACTATTGCTAAAGGCTACTTGAGCATAATTGAGTACTTGGCTTCTGCTCTACCGCCTGGGGTAATTCAGTTAGGTAGAAAAGTCACAAGAATTCAATGGCAACCAGAGAGACATGAACAAAATGGTTTCTGTTCTTCTAGGCCTGTGAAGCTACACTTCTGTGATGGATCAGTTATGCATGCTGATCATGTCATTATCACTGTTTCACTTGGAGTGCTAAAAGCTGCTATTGGTGATGATCAAGGTATGTTTCAGCCCCCTCTTCCAAATTACAAGGCTGAAGCAATTTCAAGGCTTGGTTTTGGTGTTGTTAACAAGTTGTTTATGCAATTGAGCCCAACAACACATCATTGTAAAGACGGTCATCACCGCCCCAAAAGGTTCCCATACTTGCAATTGGTTTTTCATTCACCTCACTCTGAGATGAGGCACAAGAAGATACCTTGGTGGATGAGGAGGTCACCTACCCTTTGTCCAATCTACAAGAATTCCAGTGTCCTCCTTTGTTGGTTTGCTGGGGAAGAAGCAAAGGCACTTGAGTCACTCAAAGATGAAGAGATCATCAATGGAGCTTCAGACACATTCTCCAGCTTTCGGTGTTCTGGTTATTCATACAATGAAGTTAAGTTCAGCAAAGTGTTGAAGACAAAATGGGCAACAGATCCTTTGTTTTTAGGGTCATACAGTTATGTTGCTGTGGGATCAAGTGGTGAAGATTTTGATACAATGGCTGAGCCATTGCCTAGAGAAAGCACATCATCACCACCACTTCAGATTTTGTTTGCAGGGGAAGCAACTCACAGAACCCATTATTCCACAACTCATGGAGCTTACTTCAGTGGCCTTAGGGAAGCCAATAGGCTTCTTCAACATTATCACTGCCTTGGGATATATAACAACTAG 1617 0.436 MVVKKPRXXXXXXXXANKLHSVTASKDLFEVCVVEGGSRIGGRINTSEFCGDQIELGATWIHGIGGSPLHKIAQQTHSLLSDKPWECMDGNSSDQTTITIAEGGFHLDPSIVNPITRLFKNLMDHAQGKNQKNNITERDTTARGDEFLHSFCKKVSTRVGSAGLSIGSFLRGGLDAYWDSSKDQEEFKGCGIWNRKLLEEAIFAMHENTQRTYTSAGDLLNLDYNAESEYQMFPGEEITIAKGYLSIIEYLASALPPGVIQLGRKVTRIQWQPERHEQNGFCSSRPVKLHFCDGSVMHADHVIITVSLGVLKAAIGDDQGMFQPPLPNYKAEAISRLGFGVVNKLFMQLSPTTHHCKDGHHRPKRFPYLQLVFHSPHSEMRHKKIPWWMRRSPTLCPIYKNSSVLLCWFAGEEAKALESLKDEEIINGASDTFSSFRCSGYSYNEVKFSKVLKTKWATDPLFLGSYSYVAVGSSGEDFDTMAEPLPRESTSSPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCLGIYNN 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03351 538 Pfam Flavin containing amine oxidoreductase 27 527 IPR002937 GO:0016491
Aip01g03351 538 Gene3D - 131 474 - -
Aip01g03351 538 Gene3D - 15 113 IPR036188 -
Aip01g03351 538 SUPERFAMILY FAD/NAD(P)-binding domain 29 530 IPR036188 -
Aip01g03351 538 PANTHER FLAVIN MONOAMINE OXIDASE 15 534 - -
Aip01g03351 538 PANTHER POLYAMINE OXIDASE 5-RELATED 15 534 - -
Aip01g03351 538 Gene3D - 114 525 IPR036188 -
Aip01g03351 538 SUPERFAMILY FAD-linked reductases, C-terminal domain 338 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03351 Aip-Chr1 136594261 136596744 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03351 K12259 - gmx:100783032 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03351 01 136594261 136596744 Aip01g03351 01 136594261 136596744 ECH
Aip01g03351 01 136594261 136596744 Aip03g02446 03 40552682 40555101 PCT