Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03328 ATGCGCTCATCAGGACTACCAAACTGCGGCGGTTTGCAGCAGACTCTTACGGCGGAGGCTGCTTCTGTTCTCAAACACTCTCTTGTCTTGGCTCGCCGGAGAGGCCATGCTCAGCTCACTCCTCTCCACGTGGCACCCACTCTCCTCTCCCTCTCTCCCTCCTTCAAACGAGCCTGCCTCACTTCTCACCCTTCATCTTCTTCCTCTCAACACCTTCTCCATTACAGAGCCCTCGAGCTTTGCTTCAATGTCGCCCTCAACAGGCTCCCCACCACTCCCTCTCCATTTCTTCACTCTTCTCTTCAGCCTTCTCTCTCCAACGCCCTCGTTGCCGCTCTCAAGCGAGCTCAGGCTCACCAGCGCAGAGGCTGCGTCGAGCACCACCAGCACCACCACCAGCACCACCACCAGAACCAGAACCAACCTCTTCTGGCCGTTAAGATCGAGCTTGAACACCTTACCATATCCATCCTCGATGATCCTAGCGTCAGCCGCGTCATGAGAGAAGCTGGCTTCTCCAGCACCGCCATTAAGAACAACTTGGAAGACTTGTCTAATAACTCTTCTCCACCTTCTTCTGTTTTCCATTCTTACAACGCTTCCGCTCGCGGTGGTGGTGTTTTTTCTTCTCCTTGCTCCCCTTCTGCTTCTGATAACACCACCAACCACCACCTTATCTTTTCTTCTCCGCCTAAGAAACCACCGTCCTTGCTGTATCCCTTCATCACCACCACCGCTACTGCACCATCATCTTCTTCTAAGGAGGATGATGTCAAAGCGGTTATGGATATTCTTCTAAGGACTAATCATAACAATAATAATAATAATAAGAAGAAGAAGAAGAACGTTGTCATAGTTGGTGACTCCGTTTCGTTGACGGAATCTCTTGTCGGAGAGATCATTGGAAGGTTTCAGAGGTCAGAGGTGCCTCATGAGTTGAAGACAACACAGTTCATCAGATTCCAACAATTCAGATCATTGAAGCACATGAAGAGAAGCGAAGTTGAGATGAAACTCATGGAACTCAAGAGGAAGGTGGATGATTCTTATAATGGCCATGGCATCATTATCTACATTGGAGACCTGAAGTGGACAGTGGAGGAAGAAAAAGAAGAAGAAGAAGGGGACGACGGAGTTTGTGGCGGCGGCGGTTGTTATAGCACAGTAGTGGATCATGTTGTTTCGGAAATAGGCAAGTTGTTCTCTTCTGCAACAACTGAATGTGGGGAAACAACAAAAAAAGTGTGGCTAATTGCAACAGCAACATATCAGACATACATCAGGTGTCAAATGAGACAACCCCCTCTTGAGATTCAATGGTCTCTTCAGCCTCTTCTTCTTCCTTCAGCTGGACTTGCCTTGACTCTCCATTCTTCCAGTAGTGTAATGGAAACAAAGCTCAATTGCTGTGAAGAATGTGCCTCAAATTATGAAAAGGAATCTCAATTTCTCAGACCAGGTCACAACAAAACGTTACCTTTATGGCTTCAGCCTCATACCACCGAAACAAATCATCAGAAGGATGAATTAACCGAGTTGAAAAGAAAATGGAATAGGCTATGCCAGTGTCTTCACCAAACCAAACAAGAAGCTCAGGATTATTGGAGCAACAACAATAGTTGGAATGCAAAGTCCTACACTTTTAACAATAATTCATCAAGTTCTGTGTCTTTTACAGATAAACCAACACCAACACATGGTTCCAATCTTGTATCTAGATTCAGGCGTCAAAATTCATGCACCATTGAGTTCAATTTCAGCGATAAAAGGCAAGCAACAACAGAACCAGTCTTAGGTTCCATGGAGTTATTGGAAGGTAAAGAAGTAATAAAGACTACTCTTGCTCTTGGGAATGGTGGTTCTAGTTCAGGTAGTGAAACGGTGGTGGTGGAAAATATAACCGATAGAACACTGCGAAGAGCTCATTTTTGTAAACTGTTGCAGGAGAATTTGCCATGGCACTCTGAGACTGTTCCTTCCATAGCAGAGGCCTTGCTTCATTCCAAACCCGCAAAACAAGGTAACATCACTTTGTTGTTCTTGCAAGGAAATGACAAAGTTGGCAAAACAAGGTTGGCACTTGCTGTTAAAGAATCACTTTTTGGCTCAGAAGATAACAAGTTTCTTCACATGGACATGCTGAAGAGGAAAGAGGCTTCCTTGGCTTCACATTCTGAGATGCTGGTTCAAGCATTGAAATCCCATCATCAAAAACTTGTGGTGCTGATTGAAAATGTTGATTTTGCTGATGCCCAGTTCAGGAAATGCATCTCTGATGGATTTGAAACGGGAAAGTTTGGAAATTTAAGAATAGCTGAAGAGAATTCATCAAGCCAAGTAGTGTTCATACTGACAAGTGGTGGATTCACAAGCAATAATGAAGAGAAAAATCAGGACTTTGTGATGAGTTTTATGTTGCAGGTCAGTGAAACCAAGCCTAATAACTTGGAGCCACCAATTTTTGGCCACAAGCGCAGGGCTGAGCTGGATTTGTTTTCCAAGATCAAGAGCCCAAGAATTGAAGAGAATAATGAAGATACATCCTTGGTTCATGAACAATGTAGTAGCAGAAAAAAGGACTTATCAAGAAACTCAAGCTTTAACACCCTTGATCTCAACATGAAAGCTGATGAAGATGATGATGACAAAACAGGAGAGAGTAGCCCAATTTCAAGTGATTTGACTCTTGAAACTGCGGCTGATCCACTGAACCCAAATGGATTTCTTGATTCCATTCAGAACAAGTTTGAACTCAACACAAGTCCAGCTAGGGAGAGGGAAAAGTCAGAGATGTTCTTAACTAAGATCAAAGGGTGTTTTGAGGATGCTTGTGGGAAGCAGAATCTGATGAATTTTAGTATAGATGAGAGGGTAATTGAGGAAATTTGTAATAGGTGTGGTTATTTTACTAACAGCCAATTTGAGAAATGGCTGAAAGAAATTTTTCAAAGAAGCTTATTAGAAAGAGTTAAGTATGGAGGGGGGGAAGAGAAGGGTATACTTTTTAGACTTTGTTGGAGTGGTAATGGTAAAGGAGATAATAGAAAATTGGATAGGAATGAGGGGTTTATGGGTTCATCTCTGCCAAAGTGTGTTCAAGTTAATTACTTGATGAGGTGA 3120 0.434 MRSSGLPNCGGLQQTLTAEAASVLKHSLVLARRRGHAQLTPLHVAPTLLSLSPSFKRACLTSHPSSSSSQHLLHYRALELCFNVALNRLPTTPSPFLHSSLQPSLSNALVAALKRAQAHQRRGCVEHHQHHHQHHHQNQNQPLLAVKIELEHLTISILDDPSVSRVMREAGFSSTAIKNNLEDLSNNSSPPSSVFHSYNASARGGGVFSSPCSPSASDNTTNHHLIFSSPPKKPPSLLYPFITTTATAPSSSSKEDDVKAVMDILLRTNHNNNNNNKKKKKNVVIVGDSVSLTESLVGEIIGRFQRSEVPHELKTTQFIRFQQFRSLKHMKRSEVEMKLMELKRKVDDSYNGHGIIIYIGDLKWTVEEEKEEEEGDDGVCGGGGCYSTVVDHVVSEIGKLFSSATTECGETTKKVWLIATATYQTYIRCQMRQPPLEIQWSLQPLLLPSAGLALTLHSSSSVMETKLNCCEECASNYEKESQFLRPGHNKTLPLWLQPHTTETNHQKDELTELKRKWNRLCQCLHQTKQEAQDYWSNNNSWNAKSYTFNNNSSSSVSFTDKPTPTHGSNLVSRFRRQNSCTIEFNFSDKRQATTEPVLGSMELLEGKEVIKTTLALGNGGSSSGSETVVVENITDRTLRRAHFCKLLQENLPWHSETVPSIAEALLHSKPAKQGNITLLFLQGNDKVGKTRLALAVKESLFGSEDNKFLHMDMLKRKEASLASHSEMLVQALKSHHQKLVVLIENVDFADAQFRKCISDGFETGKFGNLRIAEENSSSQVVFILTSGGFTSNNEEKNQDFVMSFMLQVSETKPNNLEPPIFGHKRRAELDLFSKIKSPRIEENNEDTSLVHEQCSSRKKDLSRNSSFNTLDLNMKADEDDDDKTGESSPISSDLTLETAADPLNPNGFLDSIQNKFELNTSPAREREKSEMFLTKIKGCFEDACGKQNLMNFSIDERVIEEICNRCGYFTNSQFEKWLKEIFQRSLLERVKYGGGEEKGILFRLCWSGNGKGDNRKLDRNEGFMGSSLPKCVQVNYLMR 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03328 1039 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 11 1010 - -
Aip01g03328 1039 Gene3D - 13 188 IPR036628 -
Aip01g03328 1039 MobiDBLite consensus disorder prediction 842 859 - -
Aip01g03328 1039 Gene3D - 625 828 IPR027417 -
Aip01g03328 1039 MobiDBLite consensus disorder prediction 873 887 - -
Aip01g03328 1039 PANTHER PROTEIN SMAX1-LIKE 5 11 1010 - -
Aip01g03328 1039 SUPERFAMILY Double Clp-N motif 16 119 IPR036628 -
Aip01g03328 1039 MobiDBLite consensus disorder prediction 842 897 - -
Aip01g03328 1039 ProSiteProfiles Clp repeat (R) domain profile. 12 187 IPR004176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03328 Aip-Chr1 136400598 136405069 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03328 - - ahf:112723607 1973.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03328 01 136400598 136405069 Aip01g03328 01 136400598 136405069 ECH
Aip01g03328 01 136400598 136405069 Aip03g02399 03 38406087 38410699 PCT