Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03303 ATGAGCAGCGAGAAGAGTAGGTACTATGAGGTTTGCAAGGGCTTCAATGGCCTCGACAAGGTTCTTCTTCGCGATCCACGTGGAAGCTCCGCCGAGGTGTACTTATACGGTGGTCATGTGACTTCTTGGAAGAATGACCATGGTGAAGAATTGCTTTTCCTTAGTAGCAAGGCTACTTTTAAGCCTCCGAAGGCAATTCGTGGAGGGATTCCAATATGCTTTCCTCAATTTAGCTGCCATGGTAACCTAGATCAGCATGGATTTGCTAGAAATCGTTTCTGGGCCATTGATGACCACCCTCCTCCCTTTCCAACAAATAATTCCATTAAAGCCTTTGTTGATTTGATTCTTAAGCCCTCAGAAGAGGAAATGAAGATTTGGCCTCACAGTTTTGAATTCCGTCTTAGGGTAGCTCTAGGACCTGGAGGGGATCTGATGTTGACATCTCGGATTAGGAACACAAACACTGATGGGAAGCCATTTTCATTCACATTTGCTTATCATACATATTTCTCTGTTTCAGATATATGCGAAGTCCGGGTAGAGGGATTAGAGACACTAGATTATCTCGACAACTTGCAGAAAAAGAAACGCTTTACTGAACAGGGGGATGCTTTAACATTTGAATCAGAAGTTGACAAGATGTATCTCAGCACTCCTACAAAGATTGCTATTATTGATCACGAGAAGAAGAGAACATATGTGTTACGTAAAGATGGGCTTCCTGATGCTGTTGTGTGGAATCCTTGGGATAAAAAAGCAAAGGCTATGACTGATTTTGGTGATAATGAGTATAAGCATATGGTTTGTGTAGAGGCTGCTGCTATTGAAAAACCTATCACTTTGAAACCTGGCGAAGAATGGAAAGGAAGACTAGAGCTTTCAATTGTTTCTTCTAGTTATTGTAGCGGGCAGCTTGATCCCCGAAGAGTTCTTCAATGCAGCTGA 948 0.4251 MSSEKSRYYEVCKGFNGLDKVLLRDPRGSSAEVYLYGGHVTSWKNDHGEELLFLSSKATFKPPKAIRGGIPICFPQFSCHGNLDQHGFARNRFWAIDDHPPPFPTNNSIKAFVDLILKPSEEEMKIWPHSFEFRLRVALGPGGDLMLTSRIRNTNTDGKPFSFTFAYHTYFSVSDICEVRVEGLETLDYLDNLQKKKRFTEQGDALTFESEVDKMYLSTPTKIAIIDHEKKRTYVLRKDGLPDAVVWNPWDKKAKAMTDFGDNEYKHMVCVEAAAIEKPITLKPGEEWKGRLELSIVSSSYCSGQLDPRRVLQCS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03303 315 CDD D-hex-6-P-epi_like 20 295 IPR025532 -
Aip01g03303 315 PIRSF PHexose_mutarotase 2 302 IPR025532 -
Aip01g03303 315 Gene3D - 16 302 IPR014718 GO:0030246
Aip01g03303 315 PANTHER GLUCOSE-6-PHOSPHATE 1-EPIMERASE 9 311 - -
Aip01g03303 315 SUPERFAMILY Galactose mutarotase-like 14 294 IPR011013 GO:0003824|GO:0005975|GO:0030246
Aip01g03303 315 Pfam Aldose 1-epimerase 19 294 IPR008183 GO:0005975|GO:0016853
Aip01g03303 315 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 9 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03303 Aip-Chr1 136141928 136146529 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03303 K01792 - gmx:100807970 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03303 01 136141928 136146529 Aip01g03303 01 136141928 136146529 ECH
Aip01g03303 01 136141928 136146529 Aip04g01356 04 25022696 25028992 PCT