Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03090 ATGGACTGGTTCTCCTGGCTTTCAAGAACAACCCTTGATCCTTCTCTCATCTACGACTATGGCCTCACTTTCGCCCGCAACGAGCTCCAATTGGAAGACGCCACTCACTTCAACCACGAGCTCCTCCAGAGCATGGGAATCTCCATTGCCAAGCACAGGCTCGAGATTCTCAAGCTAGTTAAGAAACAACAACAAGACCTCCTACCACCGCCGCCTCCGCCGCTCCGTCCCAACAAGAAGCTCTCCGCCGTCCTCAAGAGATGCCTCAGGAAGTGCATGAACAAGCTTGTGATTCACGGCCACGATGTCAACCTCAAGAACATGCCTCAGCCACCGCCGCAAATAGAGCACCAAGGGAAATGGAAAGGTATGGTGATGAGGAATCAAGCCAGTGAGGAGAAGGAAGAGAAGGAAAAGCCAGCACTGCCGGTGCCTCCGATTTACCGAAGCAAGACCATAGCGCTATCAGGGCCGTTGGATGGAAGAATGCACGAGAAAGTGGCGCCTGCTAACAAGGCCATCAAGCTATCTGGACCGTTGGATGGAAGGATGCACGACCGGATGATGGTGTACACTAATAGAAGCCCTTTGAGATCTTCGTCTGCGATTAGGCCTGTGCTGGATAGCAGGCTCACAAGAGGCCCAAGATTGTCTGGGCCTCTTGATGCAAGGCTCATGGCTGAGAATAGAAGCCCAAGAATGCCAATACTTAGAAACTCCGATGCAAGTAGGCTCGTTGAGCCCGATGAGAGCCCATTGGGCTTCAGTCCCGGTGACAAGCTTGATTTTGACTTTGACGTTGATGATGATGTTGATGATCATACTCTCTGGCCTACACTGTTTCAAGATCTGAAACCAACTTGA 864 0.515 MDWFSWLSRTTLDPSLIYDYGLTFARNELQLEDATHFNHELLQSMGISIAKHRLEILKLVKKQQQDLLPPPPPPLRPNKKLSAVLKRCLRKCMNKLVIHGHDVNLKNMPQPPPQIEHQGKWKGMVMRNQASEEKEEKEKPALPVPPIYRSKTIALSGPLDGRMHEKVAPANKAIKLSGPLDGRMHDRMMVYTNRSPLRSSSAIRPVLDSRLTRGPRLSGPLDARLMAENRSPRMPILRNSDASRLVEPDESPLGFSPGDKLDFDFDVDDDVDDHTLWPTLFQDLKPT 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03090 287 CDD SAM_superfamily 2 62 - -
Aip01g03090 287 Gene3D - 1 67 IPR013761 -
Aip01g03090 287 PANTHER OSJNBA0033G05.11 PROTEIN 1 287 - -
Aip01g03090 287 PANTHER STERILE ALPHA MOTIF (SAM) DOMAIN PROTEIN 1 287 - -
Aip01g03090 287 SUPERFAMILY SAM/Pointed domain 19 66 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03090 Aip-Chr1 134010600 134011685 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03090 - - gmx:100780479 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03090 01 134010600 134011685 Aip01g03090 01 134010600 134011685 ECH
Aip01g03090 01 134010600 134011685 Aip03g02852 03 71161063 71162743 PCT