Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02956 ATGGTGCTGTTGTCACTTACTGTGGGAATCCGGTTGGGACTGTTGNNNNNNNTTGCCTTTCTGCTCAATGGCGAAGGAGAAATTGTCAAGAATTTTCTACTTCACACATTGCAATTGCAGAGTTGGGAGAAGACTGTCGACTGCTACAGCCCAGGGCAAGGGTTGATGCCTGCAAGCTTCAAAGTTAGAACTGTGCCTCTTGATGGAAGCAATGAAGCATTTGAGGAAATTCTGGATCCTGATTTTGGCGAATCAGCTATTGGCCGTGTTGCACCTGTTGATTCAGGATTATGGTGGATTATATTGTTGAGAGCTTATGGGAAGCTAACGGGTGATTATGCATTGCAAGAAAGAGTGGATGTACAGACAGGGATAAGACTGATCCTTAAGTTATGTCTAACTGATGGATTTGACATGTTTCCTTCGCTGTTAGTTACTGATGGTTCCTGCATGATTGATAGAAGAATGGGAATTCATGGTCACCCTCTAGAGATCCAGGCATTATTTTATTCAGCTTTGCGCTGCGCTCGTGAGATATTGATAGTCAATGATTCTACCAAGAATCTAGTGGCGGCCGTTAATAGTCGCCTGAGTGCACTCTCCTTCCACATGCGAGAATATTACTGGGTAGATATGAAGAAGATTAACGAAATTTATCGCTACAAGACAGAGGAGTATTCTACCGATGCTGTCAACAAGTTTAACATCTATCCAGAGCAAATTCCTGCATGGTTAGTTGACTGGATATCCGACGAAGGAGGATACTTCATTGGCAACTTGCAGCCTGCTCATATGGACTTTAGGTTTTTCACTCTCGGAAACCTGTGGACTATTGTTTCTTCTCTAGGAACATCGAAACAGAACCAAGGCATTCTGAATTTAATAGAGGCTAAATGGGATGATCTTGTTGGCCAGATGCCTCTTAAGATATGTTATCCAGCACTGGAAGGCGAGGAATGGCGCATCATCACCGGTAGTGACCCCAAGAACACCCCGTGGTCGTATCACAATGGTGGATCTTGGCCAACACTTCTCTGGCAGTTCACATTGGCATGTATCAAGATGGGAAGGCCTGATTTGGCCCAGAAGGCTGTTGATTTAGCCGAGAAGAGGATTTCTGCGGACAGATGGCCGGAGTATTATGATACTCGAAATGGAAAGTTCATTGGCAAACAATCTCGGCTGATGCAAACGTGGACCATCGCCGGTTTCCTGACCTCAAAGATGCTCCTAGAGAATCCAGAGAAGGCATCCTTCTTGTTCTGGGAGGAGGATTTTGAACTCCTTCAGAACTGTGTCTGTATGCTGGACAAATCTGGTAGAAGGAAGTGTTCCCGCTTTGCCTCAAGATCTCAGATTCTTGTTTAG 1368 0.4466 MVLLSLTVGIRLGLLXXXAFLLNGEGEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGSNEAFEEILDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYALQERVDVQTGIRLILKLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCAREILIVNDSTKNLVAAVNSRLSALSFHMREYYWVDMKKINEIYRYKTEEYSTDAVNKFNIYPEQIPAWLVDWISDEGGYFIGNLQPAHMDFRFFTLGNLWTIVSSLGTSKQNQGILNLIEAKWDDLVGQMPLKICYPALEGEEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRPDLAQKAVDLAEKRISADRWPEYYDTRNGKFIGKQSRLMQTWTIAGFLTSKMLLENPEKASFLFWEEDFELLQNCVCMLDKSGRRKCSRFASRSQILV 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02956 455 PANTHER ALKALINE/NEUTRAL INVERTASE C, MITOCHONDRIAL 17 454 - -
Aip01g02956 455 Pfam Alkaline and neutral invertase 17 414 IPR024746 GO:0033926
Aip01g02956 455 Gene3D - 21 404 IPR012341 GO:0005975
Aip01g02956 455 PANTHER - 17 454 IPR024746 GO:0033926
Aip01g02956 455 SUPERFAMILY Six-hairpin glycosidases 19 406 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02956 Aip-Chr1 131829240 131833570 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02956 - - adu:107462633 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02956 01 131829240 131833570 Aip01g02956 01 131829240 131833570 ECH