Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02944 ATGGCAAACTTGAAAACTACAACTACTCTGTTCTTCGTCTTATTCTTAATTGCCATGACTTCATTACCATCAATAACTCTCTGCGATGAAAACCTCATAGAAAGCACTTGCAGGAAAACACCAAACTTCAATCTCTGCGTTCAATCTCTTAAAGCATTCCCCGGAAGCGCCAGCGCCGACGTCAGAGGCCTGGGCCTAATAATGGTGAAGGTGATGCAATCAAAAGCAAATGATGCCATTAACAAGATTCGTGAGCTTCAACGAAGTGGACCAAGTCCAGCACTGACTTCTTGTGCAAGCAAGTATAACGCAATTGTGGTTGGTGATATACCAGAAGCCAATGAAGCTTTTTCGAAAGGTATGCCTAAATTTGCAGAAAATGGAGCAAATGATGCTGCTAATGAAGCTACCTTTTGTGAAAATGGATTCAATGGGAGATCACCTCTCACCCAACAGAACAATGCTATGCGCGATGTTGCTGCTATTACTGCTGCTATTGCTAGACAGTTACTTTAG 516 0.4244 MANLKTTTTLFFVLFLIAMTSLPSITLCDENLIESTCRKTPNFNLCVQSLKAFPGSASADVRGLGLIMVKVMQSKANDAINKIRELQRSGPSPALTSCASKYNAIVVGDIPEANEAFSKGMPKFAENGANDAANEATFCENGFNGRSPLTQQNNAMRDVAAITAAIARQLL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02944 171 Coils Coil 69 89 - -
Aip01g02944 171 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 171 IPR035513 -
Aip01g02944 171 SMART PMEI_2 28 166 IPR006501 GO:0004857
Aip01g02944 171 Pfam Plant invertase/pectin methylesterase inhibitor 31 166 IPR006501 GO:0004857
Aip01g02944 171 PANTHER PECTINESTERASE INHIBITOR-LIKE 15 171 - -
Aip01g02944 171 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 170 IPR006501 GO:0004857
Aip01g02944 171 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 170 IPR035513 -
Aip01g02944 171 CDD CIF_like 30 170 IPR034087 GO:0004857|GO:0043086
Aip01g02944 171 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 15 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02944 Aip-Chr1 131668377 131668892 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02944 - - adu:107462721 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02944 01 131668377 131668892 Aip01g02944 01 131668377 131668892 ECH