Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02942 ATGACAAACTTGAAAACCATAACTACTCTGTTCCTCTTCTTATTCTTAATTGCCATGACTTCATTACCATCAATAACTCACTGCAGAACCCTGATCATTCCAAACAATGAAAAACTCATCGAAAGCACTTGCAAGAAAACACCAAACTACAACGTCTGCCTTCAATCTCTTAAAGCATACCCCAGAAGCTCCGGCACCGACGTCAATGGCCTGGCCCAAATAATGGTGAAGGTGATGAGATCAAAAGCAAATGATGCCATTAACATGATCCATGAGCTTCAAAGAAGTAGACCAAGTCAAGCACTGAGTTCATGTGCAAGCAAGTATAACGCAATTGTGATTGGTGATATACCAGAAGCCACTGAAGCTCTTGCGAAAGGTGATCCTAAATTTGCAGAAAATGGAGCAAATGATGCTGCTAATGAAGCTACCTTTTGTGAAAATGGATTCAATGGGAAATCACCTCTCACCCAACAGAACAATGCTATGCACGATGTTTCTGCTGTTACTGCTGCTATTGTTAGATTATTACTCTAG 537 0.406 MTNLKTITTLFLFLFLIAMTSLPSITHCRTLIIPNNEKLIESTCKKTPNYNVCLQSLKAYPRSSGTDVNGLAQIMVKVMRSKANDAINMIHELQRSRPSQALSSCASKYNAIVIGDIPEATEALAKGDPKFAENGANDAANEATFCENGFNGKSPLTQQNNAMHDVSAVTAAIVRLLL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02942 178 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 177 IPR035513 -
Aip01g02942 178 CDD CIF_like 37 177 IPR034087 GO:0004857|GO:0043086
Aip01g02942 178 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 19 178 - -
Aip01g02942 178 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 178 IPR035513 -
Aip01g02942 178 PANTHER PECTINESTERASE INHIBITOR-LIKE 19 178 - -
Aip01g02942 178 SMART PMEI_2 35 173 IPR006501 GO:0004857
Aip01g02942 178 Pfam Plant invertase/pectin methylesterase inhibitor 39 173 IPR006501 GO:0004857
Aip01g02942 178 TIGRFAM PME_inhib: pectinesterase inhibitor domain 2 177 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02942 Aip-Chr1 131655124 131655915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02942 - - adu:107462721 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02942 01 131655124 131655915 Aip01g02942 01 131655124 131655915 ECH