Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02900 ATGAACGCTTTTCCTTCCCCATCATCTTCATCTTCTTCTAACTTCAATCTCTTCACTCAGCCCAAGCACAACAACTACTACCACTTCAAGTTCAGCATCAAAATTCCAGTTTTGCCCTCTCCGCCATGTTGCTCTCTCAGAGACTCTTCCTCATCCACCACTACTGTACTGGACAAAAATGCCATTTCCTCCCAACAGAGTCCCAGTTCCAATGTAGTTTTGCCGAAAGACGCCAACTATGAGGGAGGGCTCGTGGTTCGCCGGCCGGTGATGGAGGTTTCCGGCGATGAGGAGGAGGACGGAGGGAAGGACGCGACCGATGACGATGAAGCGAATGGTTCTGCTTCTGCGATCGATGCCGGACTCACGAAGTTCGCGAAGAAGATGCCCATGTTTGAGCCCGAAAGGGTGGAATCGAATCCCAAAGAGAAGCCGCTAACTGTGAACTTGGACTTGGCACTGTACAGGGCCAAGGTCTTGGCTAGAAAATTTCTCTATGAAGAAGCAGAAGCTATACTTCAGAAGTGTATATACTTTTGGCCGGAAGATGGTCGAGCTTATGTGGCACTTGGGAAAATTTTGAGCAAGCAATCAAAGACAGGTAAAGCGAGAGAGGTGTACGAGAAGGGTTGCCAGGCTACTCAGGGTGAAAATGCTTACATTTGGCAGTGTTGGGCTGTTCTAGAAAATAAAATGGGAAATATGAGGAGGGCAAAAGAGTTATTCGACGCTGCCACGGTTGCTGATAAGAAGCATGTTGCTGCTTGGCATGGATGGGCAGTTCTAGAGTTAAAGCAGGGAAATATCAAGAAGGCAAGGAGTTTGTTAGTGAAAGGTCTTAAGTATTGTGGACAGAATGAGTATATTTACCAAACACTGGCATTGCTTGAAGTTAAAGCAAATCGGTATCAGCAAGCTCGATATTTATTCAGTCAGGCCACGAACTGTAATCCTAACAGCTGCGCTAGTTGGCTTGCTTGGGCACAAATGGAGGTGGGACAGGAAAACTACCGTGCTGCTAGGAAATTGTTTGAGAAAGCAGTACAGGCAAGTCCTAAAAATAGGTTTGCTTGGCATGTGTGGGGAATCTTTGAATCTAAAACGGGCAACATTGACAAGGGAAGAAAACTTCTAAAGATAGGCCATGCTCTAAATCCGAGGGATCCTGTTCTCCTTCAGTCTCTTGCATTGTTAGAATACAAGCACTCAACGGCAAACCTTGCTCGGGTCTTGTTCAGGAGAGCATCTGAATTGGATCCAAGGCATCAACCTGTTTGGTTTGCTTGGGGTTGGATGGAGTGGAAGGAAGGAAACTTGAATAAAGCTAGAGAGTTATATCAAAAGTCCTTATCAATTGATTCAAACAGTGAGAGTGCTGCTAGGTGTCTTCAGGCGTGGGGCGTTCTAGAACAGAGGGCTGGTAATCTTTCAGCTGCCCGAAGATTATTTAGATCATCATTGAACATAAACTCTCAGAGTTATGTGACATGGATGACTTGGGCATCACTGGAGGAAGATCAAGGAAATTCTGTTCGTGCTGAAGAGATTCGTAACCTCTATTTCCAGCAGCGCACGGAAGTTGTAGATGATGCTTCATGGGTTATGGGATTCTTAGATATTATAGACCCAGCCGTTGACCGTCTGAAGAGACTCCTCAAGCTGGACCCGAATTCTTCCAACATGATGCCGGATTCTTTCAAAAGTATCACCGGAATAAATAAAAACAAGGTTGATTTAGCCGGCACAAGTTCTGATGTCGATGATGGTGAAGAAGATGAAAGTGGTTTTGATTTGGATGCTTTCATTATGGAAAGGTTGTCCTTAGATACATCCAAGCTGGAAGTTCAGTTAGAACCATCAACTGTGAAGACAAGTAAATCTCCAAGGAGGATATGGAGATCAAACAATAGAATTGTCAAAGTGTAA 1926 0.4496 MNAFPSPSSSSSSNFNLFTQPKHNNYYHFKFSIKIPVLPSPPCCSLRDSSSSTTTVLDKNAISSQQSPSSNVVLPKDANYEGGLVVRRPVMEVSGDEEEDGGKDATDDDEANGSASAIDAGLTKFAKKMPMFEPERVESNPKEKPLTVNLDLALYRAKVLARKFLYEEAEAILQKCIYFWPEDGRAYVALGKILSKQSKTGKAREVYEKGCQATQGENAYIWQCWAVLENKMGNMRRAKELFDAATVADKKHVAAWHGWAVLELKQGNIKKARSLLVKGLKYCGQNEYIYQTLALLEVKANRYQQARYLFSQATNCNPNSCASWLAWAQMEVGQENYRAARKLFEKAVQASPKNRFAWHVWGIFESKTGNIDKGRKLLKIGHALNPRDPVLLQSLALLEYKHSTANLARVLFRRASELDPRHQPVWFAWGWMEWKEGNLNKARELYQKSLSIDSNSESAARCLQAWGVLEQRAGNLSAARRLFRSSLNINSQSYVTWMTWASLEEDQGNSVRAEEIRNLYFQQRTEVVDDASWVMGFLDIIDPAVDRLKRLLKLDPNSSNMMPDSFKSITGINKNKVDLAGTSSDVDDGEEDESGFDLDAFIMERLSLDTSKLEVQLEPSTVKTSKSPRRIWRSNNRIVKV 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02900 641 ProSiteProfiles TPR repeat profile. 423 456 IPR019734 GO:0005515
Aip01g02900 641 SUPERFAMILY TPR-like 169 399 IPR011990 GO:0005515
Aip01g02900 641 Gene3D Tetratricopeptide repeat domain 148 216 IPR011990 GO:0005515
Aip01g02900 641 ProSiteProfiles TPR repeat profile. 321 354 IPR019734 GO:0005515
Aip01g02900 641 SMART tpr_5 184 217 IPR019734 GO:0005515
Aip01g02900 641 SMART tpr_5 287 320 IPR019734 GO:0005515
Aip01g02900 641 SMART tpr_5 253 286 IPR019734 GO:0005515
Aip01g02900 641 SMART tpr_5 389 422 IPR019734 GO:0005515
Aip01g02900 641 SMART tpr_5 150 183 IPR019734 GO:0005515
Aip01g02900 641 SMART tpr_5 219 252 IPR019734 GO:0005515
Aip01g02900 641 SMART tpr_5 321 354 IPR019734 GO:0005515
Aip01g02900 641 SMART tpr_5 460 493 IPR019734 GO:0005515
Aip01g02900 641 SMART tpr_5 423 456 IPR019734 GO:0005515
Aip01g02900 641 PANTHER PROTEIN HIGH CHLOROPHYLL FLUORESCENT 107 8 635 IPR044624 GO:0003729|GO:0006397
Aip01g02900 641 SUPERFAMILY TPR-like 352 559 IPR011990 GO:0005515
Aip01g02900 641 Pfam Tetratricopeptide repeat 185 211 IPR019734 GO:0005515
Aip01g02900 641 Pfam Tetratricopeptide repeat 425 455 IPR019734 GO:0005515
Aip01g02900 641 ProSiteProfiles TPR repeat profile. 287 320 IPR019734 GO:0005515
Aip01g02900 641 SMART hat_new_1 198 231 IPR003107 GO:0006396
Aip01g02900 641 SMART hat_new_1 267 299 IPR003107 GO:0006396
Aip01g02900 641 SMART hat_new_1 437 472 IPR003107 GO:0006396
Aip01g02900 641 SMART hat_new_1 301 333 IPR003107 GO:0006396
Aip01g02900 641 SMART hat_new_1 403 435 IPR003107 GO:0006396
Aip01g02900 641 SMART hat_new_1 369 401 IPR003107 GO:0006396
Aip01g02900 641 SMART hat_new_1 335 367 IPR003107 GO:0006396
Aip01g02900 641 SMART hat_new_1 474 506 IPR003107 GO:0006396
Aip01g02900 641 SMART hat_new_1 233 265 IPR003107 GO:0006396
Aip01g02900 641 Gene3D Tetratricopeptide repeat domain 217 562 IPR011990 GO:0005515
Aip01g02900 641 MobiDBLite consensus disorder prediction 90 114 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02900 - - mtr:MTR_4g122060 933.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02900 01 130929423 130932678 Aip01g02900 01 130929423 130932678 ECH