Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02886 ATGGGCGCGCCAGAGAAATCACAGGCTAACGCCAATTCGATGCAGCGTGTCAAGGTCTATCGTCTTAATGATGACGGGAAATGGGATGACCAGGGTACTGGACATGTTGTTGTTGATTATATAGAGTTATGGTTGATTTTCCTTTATTGGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGTTTACATGTTTTTGATGAAGACGACAATGATCAGATACTTGTGCACCGCATCAATGCTGAAGATATTTATAGGAAACAAGAAGATACAATTATCTCGTGGAGAGATCCAGAATATGGTACAGATTTGGCACTTAGTTTTCAAGAGACTAGTGGCTGCTCTTACATATGGGATCATATTTGCAATGTGCGGAGGAATATACATTTTAATACAATAAATAGATGTAATGCACAcaccatcaatgatagattttctgacaaatgtctaatgggagataggATTGTGGTTGACAGTGGCATTACAGATCAGTTGCGGCTTACAGATCTAATTTTAAGTGATCAAGAATTTGTTCGGAAGCTGATGGAAGTATTTCGACTATGTGAAGACTTAGAAAATATAGACGGCCTTCACATGATTTATAAAATAGTCAAAGGGATCATTTTACTTAATAGCACACAGATTTTTGAGAGGATTTTTAGTGATGAATATATAGTGGACATTATTGGTGCGCTTGAGTATGATCCAGAGCTTCCGTGTGTTCAACATCACCGTAAATTCTTAAAGGAGCATGTAATTTTTAAGGAGGCCATACCTATAAAAGATCCCTTTGTCTTGTCAAAGATCCATCAGACATATAGAGTTGGTTTTTTGAAGGATGTTGTTTTGGCTAGGGTATTGGATGAGGCTACTAGTGCAAATCTCAACTCCATAATACATGCAAATAATGCCATGGTTGTTTCTTTGTTGAAGGATGACAACACATTTATCCAGGAGTTGTTTGCTAGGTTAAAATTGCCTTCCACCTCTCCTGAATCGAAGAAAAACTTGGTATATTTCCTGCACGAGTTTTGTACCTTAAGCAAGAGCTTACAGATGGTCCAGCAGCTTCGGCTCTTTAGGGATCTAATGAATGAAGGCGTCTTTGATGTCATCACCCAGGTTTTGCAAAGTCAAGATAAGAAGTTGGTGCTAATTGGAACAGATATCCTGATTCTCTTCTTGAATCAAGATCCTAATCTTTTGCGATCCTATGTTGTTCGGCAGGAAGGAATAACACTTCTTGGACTTCTGGTTAAGGGAATGATAACAGATTTTGGGGACAACATGCATTGCCAATTTCTTGAGATCCTTCGCAGTCTATTGGATTCGTGTACATTATCTGGACCACAGAGGGACACAGTTATTGATATTTTCTTTGAGAAGCATTTGGGTCAACTGGTTGAAGTTGTTGCAGAATCTTGTCCTTCAGAAAGTATGGTTGATGCAAGCAGCAAGTTAATAGGCTCTAGAAGAAGAGCTCAATGTCAGAATGTGACAAAGCCAGAGATACTGTCCAATATATGTGAATTGCTATGCTTTTGTGTCCTACATCACCCTTACAGGATAAAGTGCAATTTTCTTCTTAACAATGTGATTGAAAAAATTTTGCTACTGACACAGAGAAGAGAAAGATACTTAGTTGTTGGTGCTGTCCGTTTTGTTCGTACTATACTTTCCCGCCATGATGAGCATCTTATAAACTATTTTGTACGGAACAATGTTCTCAAACCAATTATAGATGCCTTTGTTGCTAATGGCAACCGCTACAATCTGCTCCATTCTGCTGTTCTGGAACTTCTGGACTATATACGGAAGGAGAATATGAAATCATTGTTGAAATATATAATTGATTCTTTCTGGGACAAGTTGGTGAAATTTGAGAATTTGGCATGCATTCACTCTGTGAGAGTGAAATATGAGCAGTCTATGGATAATGGTGGCACAAAAGATGCTGCTAATGTGGTCGATCTGCGAAGAAGAACTGATGAGCGTGCTCTGGAGGAGGAGGAGGAACATTACTTTAATGAGGACAGTGATGAGGAGGATACAGCCTCTGCATCCATTCCACCTAATCAGAAAAGGGAACGACAACCTAGTTTATCTAATGGAGTTGCTACAAGCTATTCACAAACAAGTCCAAGGTCCGGTGGACTGGTTGACTATGATGATGATGAGGATGATGAAGATTACAGGCCACCGCCAAAGAAGCAGAAAGAAGCTTCTGAAGATGACGGGGAAATGGAGTTTCTTCGGCTCAAAAGGAATCTGCCTTCAAAGGACAAGGAATCAGAACATGTGAAGAAGCAGAAGTCATTCAAGAATACAAAATCTAAAGATAGTGTTTTTGCTGCTTTGTGTTCAACCTTAAGCCAAGCTGTGCTACCTGGTAACAAAACTACAAACAACGTTCATACAGGTGGTGCACCAACTGAGGGTAGAATGAACTCAAGTGAAGACAATCAGGGAGAGGGGGCAAATGTTTCTACAAGTAGCTCTGAAAATAATAGCAAGGAAGCAGCTGAAGATAACCATGTAGAAAAAGAAACCGCAGCCTCCAGAGGATTTTCTGATCGCTTGCATGGAACGTCAGATAACATACAATTGAGTGGAGAGGAACGTCCATTGGTTCCGCCAAAATCGTCGCCAGAGATGACCGTAAATGGATCATAA 2793 0.3716 MGAPEKSQANANSMQRVKVYRLNDDGKWDDQGTGHVVVDYIELWLIFLYWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLHVFDEDDNDQILVHRINAEDIYRKQEDTIISWRDPEYGTDLALSFQETSGCSYIWDHICNVRRNIHFNTINRCNAHTINDRFSDKCLMGDRIVVDSGITDQLRLTDLILSDQEFVRKLMEVFRLCEDLENIDGLHMIYKIVKGIILLNSTQIFERIFSDEYIVDIIGALEYDPELPCVQHHRKFLKEHVIFKEAIPIKDPFVLSKIHQTYRVGFLKDVVLARVLDEATSANLNSIIHANNAMVVSLLKDDNTFIQELFARLKLPSTSPESKKNLVYFLHEFCTLSKSLQMVQQLRLFRDLMNEGVFDVITQVLQSQDKKLVLIGTDILILFLNQDPNLLRSYVVRQEGITLLGLLVKGMITDFGDNMHCQFLEILRSLLDSCTLSGPQRDTVIDIFFEKHLGQLVEVVAESCPSESMVDASSKLIGSRRRAQCQNVTKPEILSNICELLCFCVLHHPYRIKCNFLLNNVIEKILLLTQRRERYLVVGAVRFVRTILSRHDEHLINYFVRNNVLKPIIDAFVANGNRYNLLHSAVLELLDYIRKENMKSLLKYIIDSFWDKLVKFENLACIHSVRVKYEQSMDNGGTKDAANVVDLRRRTDERALEEEEEHYFNEDSDEEDTASASIPPNQKRERQPSLSNGVATSYSQTSPRSGGLVDYDDDEDDEDYRPPPKKQKEASEDDGEMEFLRLKRNLPSKDKESEHVKKQKSFKNTKSKDSVFAALCSTLSQAVLPGNKTTNNVHTGGAPTEGRMNSSEDNQGEGANVSTSSSENNSKEAAEDNHVEKETAASRGFSDRLHGTSDNIQLSGEERPLVPPKSSPEMTVNGS 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02886 930 MobiDBLite consensus disorder prediction 878 895 - -
Aip01g02886 930 Gene3D - 10 184 IPR011993 -
Aip01g02886 930 PANTHER ATP SYNTHASE GAMMA-RELATED 1 42 - -
Aip01g02886 930 MobiDBLite consensus disorder prediction 725 757 - -
Aip01g02886 930 MobiDBLite consensus disorder prediction 701 930 - -
Aip01g02886 930 PANTHER ATP SYNTHASE GAMMA-RELATED 101 860 - -
Aip01g02886 930 Gene3D - 347 661 IPR011989 -
Aip01g02886 930 SUPERFAMILY ARM repeat 347 653 IPR016024 -
Aip01g02886 930 MobiDBLite consensus disorder prediction 710 724 - -
Aip01g02886 930 PANTHER BINDING PROTEIN-RELATED 1 42 - -
Aip01g02886 930 SUPERFAMILY PH domain-like 15 164 - -
Aip01g02886 930 MobiDBLite consensus disorder prediction 817 877 - -
Aip01g02886 930 MobiDBLite consensus disorder prediction 770 816 - -
Aip01g02886 930 Pfam Phosphatase 4 regulatory subunit 3 215 403 IPR006887 -
Aip01g02886 930 PANTHER BINDING PROTEIN-RELATED 101 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02886 Aip-Chr1 130849951 130861954 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02886 K17491 - gmx:100786790 1271.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02886 01 130849951 130861954 Aip01g02886 01 130849951 130861954 ECH
Aip01g02886 01 130849951 130861954 Aip04g01037 04 14874233 14888841 PCT