Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02885 ATGCAGTCGACTCTCTCACTCTCCTTCTCTCCTTCTTCCTCCGCCGCAGCAGTTTCCAGATCAAACACCACCAGATTCTCACTAAACACTTCCACGCCCCTCAATCTCCGCTTCTGCGGCCTCAGGCCTCAGGCATTAGCTTTCAATGCTTCCGGCAACCATCGTTCCTCTCAGCTCCCGTCCCGTCCCCGCTCTCAAGCCATCTCAGCTGCGCTCTCCGCCAATGGCAGCCCTCCCAAATCCTTCGACTATGATTTGTTGATTATTGGCGCTGGCGTCGGCGGCCACGGAGCTGCGCTTCACGCTGTAGAGAAGGGTTTGAAAACGGCAATTGTGGAGGGAGACGTGGTGGGAGGGACGTGTGTGAACAGAGGCTGTGTTCCTTCAAAGGCTCTTTTGGCTGTGGCTGGTCGTATGCGAGAACTGCAGAATGATCACCATTTGAAGTCCCTGGGCTTGCAGGTTTCTGCTGCTGGGTATGACAGACAAGGAGTTGCCGACCATGCTATAAATCTTGCGTCAAAAATCCGCAATAACTTAACCAACTCAATGAAAGCACTTGGAGTAGATATACTTACTGGTTTTGGAAAAATTTTGGGTCCTCAAAAAGTGCAAATTGGCTCCTCAGACAAAATAGTAACTGCGAAAGATATCATTATTGCAACTGGATCTGTTCCTTTTGTTCCCAAGGGCATTGAAGTTGATGGGAAGACTGTGATTACCAGTGACCATGCACTCAAACTGGAGTTTGTTCCTGATTGGATAGCAATTGTTGGAAGTGGTTACATTGGCCTTGAATTCAGTGATGTATATACTGCACTTGGAAGTGAGGTTACTTTTGTTGAAGCTTTAGATCAGCTTATGCCTGGATTTGATCCAGAAATTGGAAAATTGGCTCAGAGGGTTCTTATTAACCCCCGGAATATTGATTATCATACAGGAGTTTTTGCAAGCAAGATCACGCCTGCAAGGGATGGAAAACCTGTCACGATTGAACTCATTGATGCAAAGACCAAGGAACCAAAGGACACTTTGGAGGTGGATGCTGCACTAATAGCAACTGGCAGGGCTCCATTCACACAAGGTCTTGGGTTGGAGAATATTGATGTGGTAACACAGAGAGGTTTCGTTCCTGTGGACGAGCGCATGCGAGTAATTGATTCAAATGGAAAGCTGGTACCGCATTTATTTTGCATTGGTGATGCAAATGGCAAAATGATGCTTGCTCATGCTGCCAGTGCTCAAGGAATTTCAGTTGTTGAACAAGTTACTGGAAGAGATCACGTACTCAATCATTTAAGTGTTCCGGCTGCTTGTTTCACTCATCCTGAAATCAGCATGGTTGGACTAACAGAGCCTCAAGCAAGGGAGAAAGGTGAAAAAGAGGGTTTTGAAGTAAGTGTTGCCAAAACAAGTTTTAAAGCTAACACAAAGGCACTAGCAGAAAATGAAGGAGAGGGACTTGCCAAGTTGATATATAGACCTGACAATGGAGAGATACTAGGTGTTCATATTTTTGGTCTGCATGCAGCAGATCTCATTCACGAAGCATCAAATGCAATAGCATTAGGAACACGTATTCAGGACATAAAACTTGCAGTTCATGCTCATCCAACTTTGTCAGAGGTTCTTGATGAGCTGTTCAAGTCAGCAAAGGTTAAAGCACATGCTTCCATCCCAGTAAGTGAACCAGTTGCAGTGTAA 1704 0.4572 MQSTLSLSFSPSSSAAAVSRSNTTRFSLNTSTPLNLRFCGLRPQALAFNASGNHRSSQLPSRPRSQAISAALSANGSPPKSFDYDLLIIGAGVGGHGAALHAVEKGLKTAIVEGDVVGGTCVNRGCVPSKALLAVAGRMRELQNDHHLKSLGLQVSAAGYDRQGVADHAINLASKIRNNLTNSMKALGVDILTGFGKILGPQKVQIGSSDKIVTAKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFVEALDQLMPGFDPEIGKLAQRVLINPRNIDYHTGVFASKITPARDGKPVTIELIDAKTKEPKDTLEVDAALIATGRAPFTQGLGLENIDVVTQRGFVPVDERMRVIDSNGKLVPHLFCIGDANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSVPAACFTHPEISMVGLTEPQAREKGEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKLAVHAHPTLSEVLDELFKSAKVKAHASIPVSEPVAV 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02885 567 MobiDBLite consensus disorder prediction 51 76 - -
Aip01g02885 567 Gene3D - 227 354 IPR036188 -
Aip01g02885 567 PRINTS FAD-dependent pyridine nucleotide reductase signature 86 105 - -
Aip01g02885 567 PRINTS FAD-dependent pyridine nucleotide reductase signature 215 233 - -
Aip01g02885 567 PRINTS FAD-dependent pyridine nucleotide reductase signature 254 272 - -
Aip01g02885 567 PRINTS FAD-dependent pyridine nucleotide reductase signature 347 363 - -
Aip01g02885 567 PRINTS FAD-dependent pyridine nucleotide reductase signature 381 403 - -
Aip01g02885 567 PANTHER DISULFIDE OXIDOREDUCTASE 19 559 - -
Aip01g02885 567 MobiDBLite consensus disorder prediction 51 77 - -
Aip01g02885 567 PIRSF Hg-II_reductase_MerA 44 549 IPR001100 GO:0016491
Aip01g02885 567 PRINTS Pyridine nucleotide disulphide reductase class-I signature 85 107 - -
Aip01g02885 567 PRINTS Pyridine nucleotide disulphide reductase class-I signature 117 132 - -
Aip01g02885 567 PRINTS Pyridine nucleotide disulphide reductase class-I signature 218 227 - -
Aip01g02885 567 PRINTS Pyridine nucleotide disulphide reductase class-I signature 254 279 - -
Aip01g02885 567 PRINTS Pyridine nucleotide disulphide reductase class-I signature 348 362 - -
Aip01g02885 567 PRINTS Pyridine nucleotide disulphide reductase class-I signature 396 403 - -
Aip01g02885 567 PRINTS Pyridine nucleotide disulphide reductase class-I signature 431 452 - -
Aip01g02885 567 PRINTS Pyridine nucleotide disulphide reductase class-I signature 500 515 - -
Aip01g02885 567 PRINTS Pyridine nucleotide disulphide reductase class-I signature 522 542 - -
Aip01g02885 567 Pfam Pyridine nucleotide-disulphide oxidoreductase 84 416 IPR023753 GO:0016491
Aip01g02885 567 Gene3D - 84 422 IPR036188 -
Aip01g02885 567 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-I active site. 118 128 IPR012999 GO:0016668
Aip01g02885 567 PANTHER DIHYDROLIPOAMIDE DEHYDROGENASE 19 559 - -
Aip01g02885 567 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 434 549 IPR016156 GO:0016491|GO:0050660
Aip01g02885 567 SUPERFAMILY FAD/NAD(P)-binding domain 73 425 IPR036188 -
Aip01g02885 567 Pfam Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 435 546 IPR004099 GO:0045454
Aip01g02885 567 Gene3D - 434 558 IPR016156 GO:0016491|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02885 Aip-Chr1 130832175 130837589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02885 1 558 Acyl Lipid Metabolism Gene Families AT3G16950 83.363 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02885 K00382 - gmx:100809578 970.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02885 01 130832175 130837589 Aip01g02885 01 130832175 130837589 ECH