Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02275 ATGTGGAAGTGGAAGAATGTCCTTCAACACAGTTACACGTTCACGCGCTCACACACGCGCTCTTACTCCGCCATTCAGCGATTCAGCTCAACTTCAACTGCAACTACTTCGATTGAATTCCGATGGCGCTTCCTCCTCACTCGTTCTTCGTTTTCCTATTCAAGTCAACCACAACCAGAAAACGGCGCCGTGTCAGCTGCTAAGGATGATGATAAGTTCGAGCCAGTTACTGGATGGAACAAGCAACTCGTCAAGCTTAAGATTCTACTCGCCTTTCCCTGGGAGCGTGTCCAATACGGCTCCCTCTACTCCGTCAAGCTGCGCGGCCGGATAACGGATCAGCTGCAGAGTAGGTACTCTCGAGCACTGTCTCTGCCTCAGATTTGTGAAAATTTCTTCAAAGCAGCTTATGATCCTCGGATCGCCGGCATCTACCTCCGTATTGATCCTTTGAGCTGCGGCTGGGCTAAACTCGATGAAATTCGACGTCACATCTTCGATTTCAGAAAATCAGGGAAATTTGTTGTGGCGTTTGTCCCTTCATGTGGAGAAAAGGAGTATTACCTTGCGTCTGCATGTGAAGAGATATATGCCCCTCCAAGTGCCTATGTTTCTTTGTATGGATTGGCCATTCAAGCACCTTTCTTCAGAGGTATTTTAGATAACCTAGGAATTGAGCCTCATTTGGAAAGGATTGGCAAATACAAATCAGGAGATAACCTTACTCATAGATCAATGACTGAAGAGAGTTCTGAGGTGCTGAACCAATTGCTTGACAATATCTATACAAATTGGCTGGATAAAGTGTCTTCTGCTAAAGGGAAGAAAAAAGAAGATATTGAGAACTTCATAAATGAAGGTGTGTATGATGTGGACAGACTGAAGGAAAAGGGCTACATATCAGACGTAATCTATGAGGATGAGATTATGGCCAAGTTAAGGAAGAGACTAGGAGTGAAAATTAATAAAAATCTACCTATGGTTGATTACAGAAAATACTCTTTAGTCAGGAAATGGACTCTTGGAGTATCTGGTGGTAAAGATTTGATAGCCATAATCAGAGCCACAGGGCTCATCCGCCGTGGTGATAGTTCATCAGGTGTTCGTTCCTCAGGTGTCATTGCAGAGAAGATCATTGAGAAGATTCGCAAAGTCAGAGAATCAAAACAATTTAAGGCTGTGATTATCCGAATTGATAGTCCGGGAGGTGATGCTCTTGCTTCTGATATGATGTGGAGAGAAATCAGGCTTCTGGCAGCCTCAAAACCAGTCATTGCTTCAATGTCTGATATTGCAGCAAGTGGAGGGTACTACACGGCAATGGGAGCAAGGGCAATTGTTGCTGAAAGTCTTACTTTAACTGGTTCAATTGGAGTGGTTACAGCAAAATTTAACCTGGGGAAATTGTATGAGATGATTGGCTTCAACAAGGAAATCATATCAAGGGGAAGATACGCTGAACTCCTTGCTGCTGAGCAGCGTTCTTTTCGGCCACATGAAGCAGAGTTATTTGCAAAGTCTGCACAACGCATTTATAAACAGTTTCGTGACAAGGCAGCTCTTTCGCGATCAATGACAGTAGAAAAGATGGAAGAGGTTGCGCAGGGGAGGATTTGGATGGGCAAGGATGCAGCTTCACATGGTTTAGTTGATGCTGTTGGTGGCCTTTCTCGGGCCATTTCCATAGCTAAATCAATGGCCAATATACCTAATGACAGACAGGTTACTGTTGTGGAGCTCTCAAGACCCACCCCTTCTCTACCCGAGATTTTGAGAAGTCTAGATAGTGGAGATGTGAAGAAATACAAAGCAGAGGGTAACACAGGTAAAATTCACAAAGACAATGGCGCAAATCAGAGCAGAGGTAGCAGACACAGGCGAACAATGGAAGCTCGACGGGGAACGGCGACTACGGCAGAACATGGAGAAAGTGAGACTTGA 1941 0.4467 MWKWKNVLQHSYTFTRSHTRSYSAIQRFSSTSTATTSIEFRWRFLLTRSSFSYSSQPQPENGAVSAAKDDDKFEPVTGWNKQLVKLKILLAFPWERVQYGSLYSVKLRGRITDQLQSRYSRALSLPQICENFFKAAYDPRIAGIYLRIDPLSCGWAKLDEIRRHIFDFRKSGKFVVAFVPSCGEKEYYLASACEEIYAPPSAYVSLYGLAIQAPFFRGILDNLGIEPHLERIGKYKSGDNLTHRSMTEESSEVLNQLLDNIYTNWLDKVSSAKGKKKEDIENFINEGVYDVDRLKEKGYISDVIYEDEIMAKLRKRLGVKINKNLPMVDYRKYSLVRKWTLGVSGGKDLIAIIRATGLIRRGDSSSGVRSSGVIAEKIIEKIRKVRESKQFKAVIIRIDSPGGDALASDMMWREIRLLAASKPVIASMSDIAASGGYYTAMGARAIVAESLTLTGSIGVVTAKFNLGKLYEMIGFNKEIISRGRYAELLAAEQRSFRPHEAELFAKSAQRIYKQFRDKAALSRSMTVEKMEEVAQGRIWMGKDAASHGLVDAVGGLSRAISIAKSMANIPNDRQVTVVELSRPTPSLPEILRSLDSGDVKKYKAEGNTGKIHKDNGANQSRGSRHRRTMEARRGTATTAEHGESET 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02275 646 SUPERFAMILY ClpP/crotonase 346 555 IPR029045 -
Aip01g02275 646 CDD S49_SppA_67K_type 105 315 - -
Aip01g02275 646 MobiDBLite consensus disorder prediction 617 646 - -
Aip01g02275 646 Gene3D - 345 492 - -
Aip01g02275 646 CDD S49_Sppa_N_C 350 564 IPR002142 GO:0006508|GO:0008233
Aip01g02275 646 Pfam Peptidase family S49 418 568 IPR002142 GO:0006508|GO:0008233
Aip01g02275 646 Pfam Peptidase family S49 168 319 IPR002142 GO:0006508|GO:0008233
Aip01g02275 646 TIGRFAM SppA_dom: signal peptide peptidase SppA, 36K type 350 566 IPR004635 GO:0006508|GO:0008233
Aip01g02275 646 Gene3D - 102 335 - -
Aip01g02275 646 PANTHER PROTEASE 4 40 612 - -
Aip01g02275 646 MobiDBLite consensus disorder prediction 604 646 - -
Aip01g02275 646 SUPERFAMILY ClpP/crotonase 100 306 IPR029045 -
Aip01g02275 646 PIRSF Protease_4_SppA 27 637 IPR004634 GO:0006465|GO:0008233|GO:0016021
Aip01g02275 646 Gene3D - 493 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02275 Aip-Chr1 119852541 119858638 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02275 K04773 - gmx:100809623 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02275 01 119852541 119858638 Aip01g02275 01 119852541 119858638 ECH