Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02269 ATGTGCAGGCCGGAGAGGACCAGCAGCAGCAGCAGCAGCAGCAATTGCCAAGATTTAGTGTGGATGGGTGTGAGGGTGGAGAAGGGAGGGAGAGGCTCTTCTAACGGTTCGTCGTCGTCGGTGGCGGCAGCGTCGAGATCGAGGATGAAGATGTGGATGATTAGGGCGACGACGTCGGTGCTTGTCTGGACCTGCGTGGTGCAGTTGACGACGCTGGGTGAGATGTGGGGTCCAAGAGTCTTGAAGGGTTGGCCTTCTTGTTTCACTCATGATTCTTCTTCTTCTTCTGCTGTCAGTGCCCTTGATTTCGATTCCCAACTACTTCCGTCTCCGCGTCCCGTTCTTCTCCCTCCCAAGAGAGTTTATAAGAACAATGGATACTTGATGGTGTCGTGCAATGGAGGACTCAACCAAATGAGAGCAGCGATATGTGACATGGTGGCCATTGCCAGATATCTAAATGTCACGCTTATCGTCCCTGAACTCGATAAAACTTCCTTCTGGGCTGACCCTAGTGAGTTCCAAGACATATTTGATGTTGATCATTTTATTACATCCTTGAGAGATGAGGTCAGGATATTGAAAGAGTTGCCTCCTAGACTCAAGCTGAGAGTGGAAAGAGGAATGGTTTACACCATGCCCCCAATTAGTTGGTCTGACATTTCTTACTATAAGAATCAGATTCTGCCCCTGATACAAAAGTACAAAGTTGTGCATTTAAATCGAACCGATGCTAGGCTGGCAAATAACGGTCAACCTCTGGACCTTCAGAAGCTGCGATGCCGTGTTAATTTTAGTGCTCTGAGATTTACTCCTCAGATAGAGGAGTTGGGCAGAAAGGTCATCAAGCTTCTGAGGCAAAATGGTCCATTTATGGTGCTTCATCTGAGGTATGAAATGGATATGTTGGCGTTTTCTGGCTGTACTCAAGGTTGCAACAGTGATGAGGTGGAAGAGTTGACAAGGATGAGATATGCTTATCCCTGGTGGAAAGAAAAAATAATCAACTCTGATTTGAAAAGAAAAGATGGCCTATGCCCTTTGACACCCGAGGAGACTGCTCTAACGCTTAGGGCTCTTGACATTGATCGGAACATTCAAATCTACATTGCAGCTGGAGAAATATATGGCGGGGAAAGGAGAATGGCTAGTCTTGCAAAGGACTACCCAAAATTGGTAAATTTGAAGTTCAAACATGGTAATTGGAACGTTTCTTATTGTTTAATGATGCTAAGTTTGCCTTTGTTCTTTGTTGAAACAGGTCAGGAAGGAAACACTGTTGGAACCATCTGA 1293 0.4586 MCRPERTSSSSSSSNCQDLVWMGVRVEKGGRGSSNGSSSSVAAASRSRMKMWMIRATTSVLVWTCVVQLTTLGEMWGPRVLKGWPSCFTHDSSSSSAVSALDFDSQLLPSPRPVLLPPKRVYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTLIVPELDKTSFWADPSEFQDIFDVDHFITSLRDEVRILKELPPRLKLRVERGMVYTMPPISWSDISYYKNQILPLIQKYKVVHLNRTDARLANNGQPLDLQKLRCRVNFSALRFTPQIEELGRKVIKLLRQNGPFMVLHLRYEMDMLAFSGCTQGCNSDEVEELTRMRYAYPWWKEKIINSDLKRKDGLCPLTPEETALTLRALDIDRNIQIYIAAGEIYGGERRMASLAKDYPKLVNLKFKHGNWNVSYCLMMLSLPLFFVETGQEGNTVGTI 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02269 430 PANTHER OS02G0726500 PROTEIN-RELATED 30 394 - -
Aip01g02269 430 CDD O-FucT_plant 127 394 IPR024709 -
Aip01g02269 430 PANTHER GDP-FUCOSE O-FUCOSYLTRANSFERASE-LIKE PROTEIN 30 394 - -
Aip01g02269 430 PIRSF UCP009360 17 397 IPR024709 -
Aip01g02269 430 Pfam GDP-fucose protein O-fucosyltransferase 127 395 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02269 Aip-Chr1 119689376 119692918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02269 123 392 Miscellaneous Gene Families AT2G37980 49.446 1.74e-88 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02269 K23280 - gmx:100793244 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02269 01 119689376 119692918 Aip01g02269 01 119689376 119692918 ECH