Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02267 NNAGAATTCGCCGCTCAAGCTTCCGAGCTAAGCGCCCAAGCCATCAAGCGAGCCGATCAGATCAAGCTCCTCGCCCTCGCCGACTCCGCCACCGCAACCGCACCTTCTCCGCCCGACGATGTCGACCTCGAAGCTTTCGGCATCACCGACCATCTCAGAGAATTCGTCACCGGCATCACCGTCACCACCTTCCGAGATTTCCCTCTTCAAGATGATACTGAATTGTCTGATGTCCCTGCTGTTTCTAATGTTAGGCAGGACCTAACCGATTGGCAGGAGAAACATGCCAAACTTGTTCTTTCTGCAGTCAAGGAAATTTCAAGATTGAGGTATGAGCTGTGTCCACGTGTTATGAAAGAGAGGAAGTTCTGGAGAATATATTTTATACTTGTGAATAATCATATTGCACCCTATGAGAAAAAGTACATGGAAGATGCTAAACTAAAATCATCTGAACAAGTAAAAGATCAGACAGTGATGGAACCATTAGAAGTTGAATTGACCTCTAATCAAGAAGTGCAGGAAGTGAAAAAGGAGACTAAAACTAAAACTTCAACAACTGAGCAAGACTTGGATGTATTTCTTCTGGGAGATGCAGGAGACAGTGACAATGATCAAGATAATGGCAATGGGGGCTTGGATGATGATTTAGACAACCTGGTGGAAAGTTCCGATGATGAGAAATGA 687 0.4498 XEFAAQASELSAQAIKRADQIKLLALADSATATAPSPPDDVDLEAFGITDHLREFVTGITVTTFRDFPLQDDTELSDVPAVSNVRQDLTDWQEKHAKLVLSAVKEISRLRYELCPRVMKERKFWRIYFILVNNHIAPYEKKYMEDAKLKSSEQVKDQTVMEPLEVELTSNQEVQEVKKETKTKTSTTEQDLDVFLLGDAGDSDNDQDNGNGGLDDDLDNLVESSDDEK 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02267 228 PANTHER BSD DOMAIN PROTEIN 29 226 - -
Aip01g02267 228 Gene3D BSD domain 65 147 IPR035925 -
Aip01g02267 228 MobiDBLite consensus disorder prediction 208 228 - -
Aip01g02267 228 MobiDBLite consensus disorder prediction 170 228 - -
Aip01g02267 228 ProSiteProfiles BSD domain profile. 83 135 IPR005607 -
Aip01g02267 228 PANTHER BSD DOMAIN-CONTAINING PROTEIN 29 226 - -
Aip01g02267 228 SUPERFAMILY BSD domain-like 47 139 IPR035925 -
Aip01g02267 228 Pfam BSD domain 89 135 IPR005607 -
Aip01g02267 228 SMART wurzfinal6 83 135 IPR005607 -
Aip01g02267 228 MobiDBLite consensus disorder prediction 171 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02267 Aip-Chr1 119596672 119601093 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02267 2 203 EF-hand Containing Proteins AT1G69030 48.387 1.40e-58 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02267 - - ahf:112722625 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02267 01 119596672 119601093 Aip01g02267 01 119596672 119601093 ECH