Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02247 ATGGCGTCGTCAGTGTTACCGACACCACTCCTGAAGGACGAACTTGACATCGTGATCCCAACCATCAGGAACCTGGACTTCCTTGAGATGTGGCGCCCGTTCTTCCAACCCTACCACCTCATCATCATCCAAGACGGTGATCCTTCTAAGAAGATCAACGTCCCTGAAGGTTTCGATTACGAGCTTTACAACCGCCTCGACATCAACCGCATCTTAGGCCCTAAGGCCTCCTGCATCTCCTTCAAGGACTCCGCTTGTCGCTGCTTCGGGTTCATGGTTTCAAAGAAGAAGTACATCTACACCATCGACGATGATTGCTTCGTTGCGAAGGATCCATCTGGGAAAGAAATCAATGCTCTGCAGCAGCACATTAAGAATCTTCTGAGTCCTTCAACACCATTCTTCTTCAACACTCTCTATGATCCGTATGCAGAAGGCGCTGATTTCGTTCGCGGATATCCCTTTAGCCTCCGGGAGGGTGCCCCCACGGCGGTGTCTCATGGCCTCTGGCTCAACATTCCTGATTACGACGCTCCAACTCAGCTTGTGAAGCCTATGGAAAGGAACACTAGGTATGTGGATGCAGTTTTGACAATTCCAAAGGGAACCCTGTTTCCCATGTGTGGTATGAATTTGGCATTCGATCGCGAGCTGATTGGTCCGGCAATGTACTTTGGTCTTATGGGTGATGGACAACCCATTGGACGCTACGACGATATGTGGGCTGGTTGGTGCACAAAGGTATACACTTATGATTCATTGATTGGCTTATTCTTTTTGTAG 783 0.4917 MASSVLPTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIIQDGDPSKKINVPEGFDYELYNRLDINRILGPKASCISFKDSACRCFGFMVSKKKYIYTIDDDCFVAKDPSGKEINALQQHIKNLLSPSTPFFFNTLYDPYAEGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQLVKPMERNTRYVDAVLTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVYTYDSLIGLFFL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02247 260 PANTHER UDP-ARABINOSE MUTASE 2 250 IPR037595 -
Aip01g02247 260 Pfam Reversibly glycosylated polypeptide 11 250 IPR037595 -
Aip01g02247 260 PANTHER UDP-ARABINOPYRANOSE MUTASE 3 2 250 - -
Aip01g02247 260 SUPERFAMILY Nucleotide-diphospho-sugar transferases 39 242 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02247 Aip-Chr1 118986097 118987723 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02247 K13379 - qsu:112009791 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02247 01 118986097 118987723 Aip10g02837 10 121207329 121209654 ECH
Aip01g02247 01 118986097 118987723 Aip01g02247 01 118986097 118987723 ECH