Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02230 ATGCTTGTGGCTTGTGACCAGAACTTTCTAACTGTTCTTTCTTATCTTACTCAAATTTTCTTCATACACCACTTGCATTTGTACTTTTGCTTTCTTGTTTTATCAATTTTTGTTGCTCTTTGTTTCTTCTTCAAATCCTTCATTCAGAGAAAAAGAAAATCTTCAAAGTTGTTGTTCTGTTCAAGGATTTCACCTTTCTCTTGGATATCAATGGAGATTAAAGAAAAAAAATGGATGAAAAGGTCGTCATCAACATCATCAATAATCTATATTGAAGAAAATGAGAGGAAAGAGAAAGATCCCTTTGTTCCATGGTTGGAGAGGACTTGGTCAATGCCATCAGAGACTGTGATGATGAAGTGTAGGGACATGCACAGGGCTGCCAAAATATTACTCCTCCACGAGCAGAACAGACGTGGCGCCGCCGCACCCAGTGTTTTGCCGTCATCAGCTCATGTCATTAGCCGTGTCAAGAAGCTGCTTGCGACTCCTAATGGAGATTCAAGACATGAGGTAGGAGAATCTAGTTCCAAAATAAAGACATCACCGACAGTTATTAAAGGATATGATCCCAAGGAATCATCACAACTACCAACTCTTCAGAAAATGCCTCCTCCAGCCAAAAGGCTCAAGACAAAGAAGAATCAATCATCTTGTGTCAAAGGTGATCATAAGAAAAATAATAATGATGATGCAATGGAGATTCTGAGACATATTCCAAGTGTGAGTACAAGAGGAGATGGGCCAAGTGGGAAGAGAATAGAAGGGATACTGTACAAGTATAACAGAGGACAAGTGTGTATTGTGTGTGTCTGCCATGGAAGATTCCTCTCTCCATCAGAGTTTGTCATGCATGCTGGTGGAAACCAAGTAGACAATCCGATGAAACACATCACTGTCTCTTCTAATAACTCAATCTAA 921 0.3974 MLVACDQNFLTVLSYLTQIFFIHHLHLYFCFLVLSIFVALCFFFKSFIQRKRKSSKLLFCSRISPFSWISMEIKEKKWMKRSSSTSSIIYIEENERKEKDPFVPWLERTWSMPSETVMMKCRDMHRAAKILLLHEQNRRGAAAPSVLPSSAHVISRVKKLLATPNGDSRHEVGESSSKIKTSPTVIKGYDPKESSQLPTLQKMPPPAKRLKTKKNQSSCVKGDHKKNNNDDAMEILRHIPSVSTRGDGPSGKRIEGILYKYNRGQVCIVCVCHGRFLSPSEFVMHAGGNQVDNPMKHITVSSNNSI 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02230 306 PANTHER AFP HOMOLOG 2 154 303 IPR031307 GO:0007165
Aip01g02230 306 Pfam Tify domain binding domain 268 306 IPR032308 -
Aip01g02230 306 MobiDBLite consensus disorder prediction 216 230 - -
Aip01g02230 306 MobiDBLite consensus disorder prediction 164 230 - -
Aip01g02230 306 PANTHER NINJA-FAMILY PROTEIN AFP1 154 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02230 Aip-Chr1 118087415 118091707 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02230 - - adu:107471814 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02230 01 118087415 118091707 Aip10g02853 10 121681647 121683729 ECH
Aip01g02230 01 118087415 118091707 Aip01g02230 01 118087415 118091707 ECH