Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02229 ATGTATATATGTTCATTCGGCGAAGGAACAAGACTCATAAAACAAAGAGTGGACTTGACTTCAAGGGCCATTTCCATGGCTAACCCAACCAGTTTTTCACTTGTGGTATTTCTATTGTTTGTTATTGGATGCACTGCAAGGCCTATTTATCCACTTCCTAGTCAAGACGATCATAGAATTCGGCAGCCTCTACAAACTTTCCGGCCATACAACATTGCACACCGAGGCGCAAATGGAGTGATTCCTGAAGAAACTCGTCCTGCATACTTGAAAGCTATTGAAGATGGTGCAGATTTCATTGAAACTGATATCTTATCTTCCAAAGATGGTGTTCTTATATGTTTCCACGATGTTACCCTTGATGATACCACTGACATTGCGAAGTACAAAAAGTTTGAAAATCGCAAAAGGACATACGAAGTCGAAGGGGTCAACAGAACTGGATTTTTTACTGTTGATTTCACAATTGAGGAATTAAAGTCATTAAGGGTGAATCAGAGGTATAGCTTCAGGGATAAACAGTATAATGGAAAATTTGGAATCATCACTTTTGAAGAGTTCATTTCCATTGCATTGGATGCAGATAGAGTTGTTGGAATATATCCAGAGATAAAGAATCCAGTTTTTATCAATCAGCATGTGAAATGGCCAAATGGCAAAAGATTTGAAGACATATTTGTCAAGACACTTCAGAAATATGGATACAAAGGTTCATACTTATCAAAATATTGGCTAAAACAACCTGTATTTATTCAGTCATTTGCTCCAACATCACTTGTGTATATATCAAATCAAACGGATTTGCCCAAGGTTTTCTTAATTGACGATGTTACTGTTTCAACGCAAGACACTAATCAGTCATATTGGGAAATCACATCCGATAAATACCTAAACTACATAAAGAATTACGTTGTTGGAATTGGACCTTGGAAGGACACAATAGTACCTGTGGCAAAGAATTATTTGGAAGAGCCTAGTGATCTTGTTGCCAGGGCACATGCTCATAACCTTCAGGTGCATCCATATACTTACCGAAATGAGAACCAGTTTTTGCACTTCAACTTTAGTCAAGATCCTTATAAAGAGTATGATTATTGGATCAACAAAATAGGAGTTGATGGCCTCTTCACAGATTTCACAGGAAGTCTTCACAATTTTCAGGAATGGACCTCCAGTGATACGAAGACTGAATCCAATATATTGCATAAAATTGCTCTTTTGGTCTCTCCTTATAATAACTAA 1242 0.372 MYICSFGEGTRLIKQRVDLTSRAISMANPTSFSLVVFLLFVIGCTARPIYPLPSQDDHRIRQPLQTFRPYNIAHRGANGVIPEETRPAYLKAIEDGADFIETDILSSKDGVLICFHDVTLDDTTDIAKYKKFENRKRTYEVEGVNRTGFFTVDFTIEELKSLRVNQRYSFRDKQYNGKFGIITFEEFISIALDADRVVGIYPEIKNPVFINQHVKWPNGKRFEDIFVKTLQKYGYKGSYLSKYWLKQPVFIQSFAPTSLVYISNQTDLPKVFLIDDVTVSTQDTNQSYWEITSDKYLNYIKNYVVGIGPWKDTIVPVAKNYLEEPSDLVARAHAHNLQVHPYTYRNENQFLHFNFSQDPYKEYDYWINKIGVDGLFTDFTGSLHNFQEWTSSDTKTESNILHKIALLVSPYNN 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02229 413 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 35 412 - -
Aip01g02229 413 ProSiteProfiles GP-PDE domain profile. 69 387 IPR030395 GO:0006629|GO:0008081
Aip01g02229 413 CDD GDPD_ScGlpQ1_like 69 380 - -
Aip01g02229 413 Pfam Glycerophosphoryl diester phosphodiesterase family 74 381 IPR030395 GO:0006629|GO:0008081
Aip01g02229 413 SUPERFAMILY PLC-like phosphodiesterases 69 385 IPR017946 GO:0006629|GO:0008081
Aip01g02229 413 PANTHER OS01G0763600 PROTEIN 35 412 - -
Aip01g02229 413 Gene3D Phosphatidylinositol (PI) phosphodiesterase 67 386 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02229 Aip-Chr1 117678357 117682572 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02229 31 411 Acyl Lipid Metabolism Gene Families AT1G74210 70.833 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02229 K01126 - gmx:100778145 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02229 01 117678357 117682572 Aip01g02229 01 117678357 117682572 ECH