Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02219 ATGGAGTCAGGGAAAGACAACGGCACCAAACTCACCGGTCAACGGCGCGTGGGTCTACTCTACGACGAGAGGATGTGTAAGCACGAGAACCTTCACGACGGTTACCATCCCGAAACCCCCAACCGTATTAGGTCCATTTGGAACAAGCTTCAATCCACGGGCATTACCCAACGATGTGTGATTTTGGATGCTAAAGAAGCTGAAGACAAACATATACTGTCAGTACATTCCAAAAAACATGTGAATTTTATCAAGAAAATAAGCTCAGAGTCAGATTCACGGAGGCTTAAGACTGCGTCAAAATTTGATTCGATATACTTCAATGAAGGTTCATCAGAAGCTGCTTATCTTGCTGCTGGCTCTGCTATAGAGGTTGTTGAAAGAGTGGCAAGCAGGGAATTCAATTCTGCTTTTGCAATTGTTAGGCCTCCAGGTCATCATGCAGAACGTGATGAACCCATGGGTTTTTGTCTATTCAACAATGTGGCGATTGCGGCAACGTATCTCTTAGAGGAACGTCCAGAATTAGGTATTAAAAAAATTTTAATTGTTGATTGGGACATCCATCATGGAAATGGTACACAAAAAATGTTCTGGAATGACTCTCGAGTTTTATTCTTCTCTGTTCACAGGCATGAATTTGGGAGCTTTTATCCTGCAAGTGATGATGGCTTTTATACGATGGTTGGAGAAGGAGCAGGTGCTGGATATAATATAAATGTACCATGGGAGAATGGAAGATGTGGTGATGCAGATTACTTTGCAGTGTGGGACCACATTTTGCTACCTGTTGCCAAAGAGTTTAATCCAGACATGATTATTGTTTCTGCTGGCTTTGATGCAGCCATTGGTGATCCTCTGGGGGGCTGTCGTGTTTCGCCATTTGGTTATTCTGTCCTGTTGAAAAAGTTGATGAATTTCGCTGAAGGTAGGATTGCACTAATTTTAGAAGGAGGATATAACCTTGACTCCATTGCAAAGTCGACGCATGCTTGCGTGGAGGTTTTGCTTGAAGACGAGCCTATTGTTGGTTCATCTGAGGCCTATCCATTTGAGTCCACCTGGCGTGTGATTCAAGCAGTTCGCCAGGAATTAAGTTGCTTTTGGCCTACACTTGCTAATGAATTGCCACAAAAATTAATTTCTCAGATTGCTCCTCCCCCACATACTCTTATCTCAAGCTCCGACTCCGAGACAGAGGATGACAAGGGTCGGCAGAATTCAGATCTTGCAGAGCTTCTACAGGATGTCATAAAACCACTTTCTGAGCTGAAGGTTGATGCAGATCATCAGATTGATGATATGAATTCCTGGCGAACAGAATTTTCAAATATTTACATATGGTATGCCTCATATGGATCAAATATGTGGAATTCAAGATTTTTGTGCTATGTAGCAGGTGGACAGGTGGAAGGCATGAAAAACACCTGTTCTGGTTCACTGGATAAAGCTTTGCCGAAGGCAATAGTATGGAAGACTTTTCCTTGCCATACATTTTTTGGCCGTGAAGCTTCACATACGTGGGGTCCTGGAGGGGTTGCATTGCTTAATCCAGTAGAAACATCTCAGTACAAGACACACATGTGTCTGTACAAAATTTCGATGGAGCAATTCAATGATATTTTATTTCAGGAAAATGGATTAAGCATTGATACTGGCTCTCCTTTACTTGATATAGCAACCCTGAATGCTATCTCTGAGAAGGAATTCAATTCTCAGGAGGTTAAGGATGGTTGGTATGGTAATGTTGTTTACTTGGGGAAGGAGCAGGACATCCCCATAGTTACCATGACGTGTTCGCTCGCTGATATTGAAGGCTTCAAATCTGGGAAGCTACCATTACGAGCCCCTAATGAGGCATATACCAAAACCTTAATTAAAGGATTGGTAGAGGGCAAACAACTTTCTGAGGGGGAAGCCATTGCTTACATTGAAGCTGCTTCTAAATCCTTAATTTGCAGCTAG 1965 0.426 MESGKDNGTKLTGQRRVGLLYDERMCKHENLHDGYHPETPNRIRSIWNKLQSTGITQRCVILDAKEAEDKHILSVHSKKHVNFIKKISSESDSRRLKTASKFDSIYFNEGSSEAAYLAAGSAIEVVERVASREFNSAFAIVRPPGHHAERDEPMGFCLFNNVAIAATYLLEERPELGIKKILIVDWDIHHGNGTQKMFWNDSRVLFFSVHRHEFGSFYPASDDGFYTMVGEGAGAGYNINVPWENGRCGDADYFAVWDHILLPVAKEFNPDMIIVSAGFDAAIGDPLGGCRVSPFGYSVLLKKLMNFAEGRIALILEGGYNLDSIAKSTHACVEVLLEDEPIVGSSEAYPFESTWRVIQAVRQELSCFWPTLANELPQKLISQIAPPPHTLISSSDSETEDDKGRQNSDLAELLQDVIKPLSELKVDADHQIDDMNSWRTEFSNIYIWYASYGSNMWNSRFLCYVAGGQVEGMKNTCSGSLDKALPKAIVWKTFPCHTFFGREASHTWGPGGVALLNPVETSQYKTHMCLYKISMEQFNDILFQENGLSIDTGSPLLDIATLNAISEKEFNSQEVKDGWYGNVVYLGKEQDIPIVTMTCSLADIEGFKSGKLPLRAPNEAYTKTLIKGLVEGKQLSEGEAIAYIEAASKSLICS 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02219 654 Gene3D - 439 650 - -
Aip01g02219 654 Gene3D Histone deacetylase domain 10 385 IPR037138 -
Aip01g02219 654 PANTHER BNAA09G05590D PROTEIN 14 565 - -
Aip01g02219 654 Pfam Histone deacetylase domain 36 335 IPR023801 -
Aip01g02219 654 PANTHER HISTONE DEACETYLASE 14 565 - -
Aip01g02219 654 PRINTS Histone deacetylase superfamily signature 270 280 IPR000286 -
Aip01g02219 654 PRINTS Histone deacetylase superfamily signature 143 166 IPR000286 -
Aip01g02219 654 SUPERFAMILY Arginase/deacetylase 15 362 IPR023696 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02219 Aip-Chr1 117304616 117322566 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02219 K11406 - gmx:100788831 1076.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02219 01 117304616 117322566 Aip01g02219 01 117304616 117322566 ECH
Aip01g02219 01 117304616 117322566 Aip01g02103 01 113703960 113704803 PCT