Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02217 ATGGCTGCTTATCTTATTGCTCTGCTTCTCTTCGCCTTCACTTCCTCTTCAAGCGGTGGGGGTTTGTGGTGCGTATGCAAGGACGGAAGCGACGCGATGCTACAGAAAACATTGGACTACGCGTGCGGTGCAGGTGCAGACTGTAACCCACTGCACCAGGGCGGTCCCTGTTTCCAACCTAACACCGTTAGGGCTCATTGCAACTACGCCGTTAACAGTTACTTCCAGAAGAAGGGCCAAGCTCAAGGCGCTTGTGAGTTTGCCGGAACAGCCACCACCGTTACATCTGACCCCAGCGCTAGTGGTTGTATGTACCCTTCAACCGCCAGTGCTGCAGGCACTAGTTCAACACCTATGACAAACACACCATCAATGGGCACTTCCACTGGAACAAACCCATCAAGTGGCACCACCAGCACGGGCACTGGGACGGGCACTGGCACTGGCACCACTCCATACAGTACAAGCCCTGTACTAGGAGGGATTGGCAGTGGCGGCATGGGGCCTTCCGGATCTGGCATGAACGACGAGAGTCACGGTGGGGTTAAACTTGTTAACAATTATTTGCTCTCTGCATTCTCAGTAGCTCTCTTTTCCGCATTCTTTATGGTTTGGTGA 618 0.534 MAAYLIALLLFAFTSSSSGGGLWCVCKDGSDAMLQKTLDYACGAGADCNPLHQGGPCFQPNTVRAHCNYAVNSYFQKKGQAQGACEFAGTATTVTSDPSASGCMYPSTASAAGTSSTPMTNTPSMGTSTGTNPSSGTTSTGTGTGTGTGTTPYSTSPVLGGIGSGGMGPSGSGMNDESHGGVKLVNNYLLSAFSVALFSAFFMVW 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02217 205 PANTHER BETA-1,3 GLUCANASE 2 188 IPR044788 -
Aip01g02217 205 Gene3D - 17 118 - -
Aip01g02217 205 SMART X8_cls 22 105 IPR012946 -
Aip01g02217 205 Pfam X8 domain 22 92 IPR012946 -
Aip01g02217 205 MobiDBLite consensus disorder prediction 110 155 - -
Aip01g02217 205 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 4 2 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02217 Aip-Chr1 117210456 117214832 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02217 12 105 Glycoside Hydrolase AT3G55430 41.053 1.98e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02217 - - gmx:100500078 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02217 01 117210456 117214832 Aip01g02217 01 117210456 117214832 ECH