Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02192 ATGAATGAAGGAACACATTTCAACTACCACAAGACATGCCCCTTTCGTTTCCCGTTTTGGTGCCTCACAAACATTTCCTTCTTCTTCTGCTTATGCTGCTCCTCCTTTGAGACAAGGTTTGAGGTTTCATCTTGTTTATCATCAACTTTGTTTTTGTGTTTTTTCAAAAAGAAGAAGCTCAACACAATTAAAGTGAAACGTGAAACTCATTACAAGTTAATTTGGACAAGTTCAGTTGCAAATATCGAACACGGTTCGCTTATCGTCGATGGAGCTCGATCGGTAGCTGATACCGACGATAACTTCATCTGTGCCACCATTGATTGGTGGCCTCAAGATAAGTGTGACTACAACAATTGTCCATGGGGAAATACATCTATTATAAATTTGGACTTGTCTCAGCCTTTACTGACCAAGGCTATCCAAGGTCTCAAGCCTTTGAGGATAAGAATTGGAGGTTCATTGCAAGATCAAGTGTTATATGAGGTAGGGAATTTGAAGTCCCCATGCCAACAATTTCAGAAGAAGAATGGTGGATTGTTTGGATTCTCAAAAGGATGCTTACAAATGAAAAGGTGGGATGAGCTTAACCAATTCTTCAACAAGACAGGGGCAATTGTGACATTTGGCTTGAATGCCCTAAATGGGAGGCGCAAGACGAAACGTGCTGCCTGGGTAGGAGATTGGGACTCTACTAATGCTCATGATTTCATAAGCTACACTATTTCAAAGGGATACCAAATCGATTCGTGGGAATTCGGTAATGAGTTGAGTGGTAAGGGCATTGGTGCAAATGTTGGTGCAGCACAATATGGAAAAGATTTGATAAAGCTTAAACAAATTCTAAACACAATGTACCATAACTACAAGTTCAAACCTTCACTTATAGCACCTGGAGGATTCTATGACAAGAATTGGTTTGATAAACTTCTTCAGGTCACAGGTTCTGGTTTACTCAATGCACTCACTCATCACATATATAACTTGGGCCCAGGTAGTGATGTGAATCTTGATTCTAAGATTCTAGATCCTGAGCGTTTGAGCAATGTAGAATCAGTATTCAGCAACATGTCAGAGACAATTAAGAAATATGGTCCTTGGTCTGCTGCATGGGTTGGAGAAGCGGGTGGTGCATACAACAGTGGTGGCCGTGATATCTCTGACACTTTTGTTAATAGCTTTTGGTACTTAGATGAACTTGGAATAGCATCAAAATACAACACAAAGGTTTATTGCAGGCAGAGTTTAATTGGAGGAAACTATGGTCTTCTCAATACCACCACTTTCTCTCCCAATCCTGATTACTACAGGCAACTAATGGGGAAGAAGGTTCTTTCAGCTTCGAGTGATGTTTTTTCACCTTTTATACGTACTTATGCTCATTGCTCAAAAGGCAGAGATGGTGTAACATTTTTGGTGATCAACTTAAGCAATAAGACTCACTTCTTACTAACAATTCATGACCGTGAGGCAAAAGAAGATGGTGCCAAACACATCCTAAAAGAAACCTCGGTTTCTAGTCATATCAAAAGTGCATTTTCATGGGTTGGAACAAAAGCATCAGATGTGACATTCAGAGAAGAGTACCACCTAACCCCAAAAGATGGTTACCTTAGAAGCCAAACCATGTTGCTTAATGGTAATCCACTAGAGCTAACTAATGGTGGAGAAATTCCAAGGTTGGATCCAGTTAGGAGTAATGTATATTCACCAATACACATAGATCCTTTATCCATTGTGTTTATTGTGTACCCTAACTTTGATGCTCCAGCTTGTGCCGTTGAACATAAAAAATCTTTAATATAA 1806 0.397 MNEGTHFNYHKTCPFRFPFWCLTNISFFFCLCCSSFETRFEVSSCLSSTLFLCFFKKKKLNTIKVKRETHYKLIWTSSVANIEHGSLIVDGARSVADTDDNFICATIDWWPQDKCDYNNCPWGNTSIINLDLSQPLLTKAIQGLKPLRIRIGGSLQDQVLYEVGNLKSPCQQFQKKNGGLFGFSKGCLQMKRWDELNQFFNKTGAIVTFGLNALNGRRKTKRAAWVGDWDSTNAHDFISYTISKGYQIDSWEFGNELSGKGIGANVGAAQYGKDLIKLKQILNTMYHNYKFKPSLIAPGGFYDKNWFDKLLQVTGSGLLNALTHHIYNLGPGSDVNLDSKILDPERLSNVESVFSNMSETIKKYGPWSAAWVGEAGGAYNSGGRDISDTFVNSFWYLDELGIASKYNTKVYCRQSLIGGNYGLLNTTTFSPNPDYYRQLMGKKVLSASSDVFSPFIRTYAHCSKGRDGVTFLVINLSNKTHFLLTIHDREAKEDGAKHILKETSVSSHIKSAFSWVGTKASDVTFREEYHLTPKDGYLRSQTMLLNGNPLELTNGGEIPRLDPVRSNVYSPIHIDPLSIVFIVYPNFDAPACAVEHKKSLI 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02192 601 Gene3D Glycosidases 121 443 - -
Aip01g02192 601 PANTHER HEPARANASE-LIKE PROTEIN 1 79 592 - -
Aip01g02192 601 SUPERFAMILY (Trans)glycosidases 98 442 IPR017853 -
Aip01g02192 601 PANTHER HEPARANASE-RELATED 79 592 - -
Aip01g02192 601 Pfam Glycosyl hydrolase family 79, N-terminal domain 86 401 IPR005199 GO:0016020|GO:0016798
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02192 Aip-Chr1 115991696 115996145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02192 80 593 Glycoside Hydrolase AT5G61250 59.619 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02192 K07964 - gmx:100792792 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02192 01 115991696 115996145 Aip01g02192 01 115991696 115996145 ECH