Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02188 ATGGAGTACCCTCGCAGAGCAACAAGAGATGTTTCTCTTCATGAACTCAGCAAAAGGCTTGCTGAGTTTTCTCAAGTGAGAGGATGGGATGAATATCACAGTCCAAGAAATCTCCTTTTGGCTCTTGTCGGAGAGGTGGGAGAACTATCAGAGATATTCCAATGGAAAGGAGAAGTAGGAAAGGGATTACCAAATTGGAGTTCAGCTGATAAGGAGCACTTAGAAGAAGAGCTTTCAGATGTTCTGCTCTACCTTGTTCGTCTTGCTGATGTTTGTGGCCTTGATCTTGGTCAAGCAGCTCTTGCAAAAATAATCAAGAATGCTCAAAAATACCCTCTTGTTACTAATCATAATGATCATCACCACAACCCTGAACCCAAATTAGAAAAGTTAAATTCTGAGTAA 405 0.4099 MEYPRRATRDVSLHELSKRLAEFSQVRGWDEYHSPRNLLLALVGEVGELSEIFQWKGEVGKGLPNWSSADKEHLEEELSDVLLYLVRLADVCGLDLGQAALAKIIKNAQKYPLVTNHNDHHHNPEPKLEKLNSE 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02188 134 MobiDBLite consensus disorder prediction 115 134 - -
Aip01g02188 134 Pfam MazG-like family 45 118 IPR025984 GO:0009143|GO:0047429
Aip01g02188 134 PANTHER - 2 117 - -
Aip01g02188 134 PIRSF UCP029826_pph 4 127 IPR025984 GO:0009143|GO:0047429
Aip01g02188 134 CDD NTP-PPase_RS21-C6_like 18 107 IPR025984 GO:0009143|GO:0047429
Aip01g02188 134 Gene3D - 5 116 - -
Aip01g02188 134 PANTHER DCTP PYROPHOSPHATASE 1 2 117 - -
Aip01g02188 134 SUPERFAMILY all-alpha NTP pyrophosphatases 9 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02188 Aip-Chr1 115788809 115789639 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02188 K16904 - gmx:100500294 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02188 01 115788809 115789639 Aip01g02188 01 115788809 115789639 ECH