Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02157 ATGAGCTCCTCGCCCCATCGTTCTCGCGGCGGCAACGGGAACGGAGACGGTGGAGATAATAGGCCGAGATTCTTCGACGCAAAAACGAAGATCAAGTGCTGGAACAACGCCGAAATCGTTCCCGGCCGCCACCCTGAGAGGTGGCGCAAAGACGCCGCTGGCAACATTGTTTGCAAGCGCTTCAAAGACTGCCTCGGCTGCCTCTGCTACGAGTACGATCACATCGTCCCCTTCTCCAAAGGGGGTGAATCCACTGAAGAAAATTGTCAGATACTTCAGTCAAGAGTGAACAGATTCAAATCAAATAAATATCAGGTTGATGCTGATCAACTCAAAGGATACTCTTGTGATGTTATCTTTACTGACAAGGAGCTCGACATAATCGAGATGGCTGTTTATGGCGATGTTATCCGGCCAGGAAACCAGTGCCGTTGCAGAACTGTTGCCGAGATGCTTGGCAAATACAAGTCTAAAGATGAGACAACTGCATGCAAGTTGCCATAG 504 0.496 MSSSPHRSRGGNGNGDGGDNRPRFFDAKTKIKCWNNAEIVPGRHPERWRKDAAGNIVCKRFKDCLGCLCYEYDHIVPFSKGGESTEENCQILQSRVNRFKSNKYQVDADQLKGYSCDVIFTDKELDIIEMAVYGDVIRPGNQCRCRTVAEMLGKYKSKDETTACKLP 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02157 167 Pfam HNH endonuclease 71 94 IPR002711 GO:0003676|GO:0004519
Aip01g02157 167 PANTHER F6A14.21 PROTEIN 18 167 - -
Aip01g02157 167 Gene3D - 34 116 - -
Aip01g02157 167 SMART HNH_5 52 98 IPR003615 -
Aip01g02157 167 MobiDBLite consensus disorder prediction 1 22 - -
Aip01g02157 167 PANTHER HNH ENDONUCLEASE 18 167 - -
Aip01g02157 167 CDD HNHc 59 98 IPR003615 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02157 Aip-Chr1 114970994 114973088 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02157 - - ahf:112722534 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02157 01 114970994 114973088 Aip01g02157 01 114970994 114973088 ECH